Gene Cthe_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3126 
Symbol 
ID4809689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3693630 
End bp3694541 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content42% 
IMG OID640108559 
ProductNUDIX hydrolase 
Protein accessionYP_001039514 
Protein GI125975604 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.573169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA GTAAGAAGGT TAACAAACAA GGACTTACTG AAGAGGAATT TTTGGAATCT 
TATGATGCGA GCAAGTATGA AAGGCCGTCA GTTACGGTGG ATATGCTGAT TTTTACGGTT
ACCAATGAAA AGAAGGAAAA TTACAGGAAG CTTCCGGAAA AGGTTTTAAG ACTGCTTATG
ATTAAAAGGG CGGATCATCC GTATATAGGA CAATGGGCTC TTCCGGGCGG TTTTATAAAA
ATGGATGAGA GCCTGGAAGA GGGAGCTTTG AGGGAGCTGA AAGAAGAGAC AAATATTGAC
AATATATATA TGGAGCAGCT TTATACCTGG GGAGATGTAA ACAGGGATCC GCGTACAAGG
ATAATAAGTG TTTCGTATAT GGCATTGGTG GACAGTTCCA ATCTGAATAT TAAAGCCAGT
GATGACGCCG ACGATGCAAA GTGGTTTACC GTATCATGCA ATTTATATCA GGAACAAAAA
ACGTTAACGG AAAAGGGATA TATTCTTCAG CGCTTGTATA ACCTGAGGCT GTCCGATGAA
GAAGACAATC TTTCGGCAGT TATAAAGGTT GTAAAAACCG TTGAGGGCAG AGTGTCCAGA
GTGGAGAGGG AAATTGTTGA GTCACACGGT ATTGCGTTTG ACCATGCAAA GATTATAGAG
TACGCCGTCG AAAGGCTGCG CAATAAAATT GAGTATACGG ATATTGCTTT TAACCTTATG
CCGGAGAGGT TTACTTTGAC GGAACTTCAG CAGGTGTACG AGGTTATTCT GGGTAGGGAG
CTGTTAAAAG CCAATTTCAG AAGAAAAATA GCCAATATGG TAATTGAGAC GAATGAGTAC
ACCAAAGATG CGGGACACAG GCCTTCCAAA CTGTTCCGAT TCAATCCGAA TTGGAATGAT
ATTTCCGAAT AG
 
Protein sequence
MSESKKVNKQ GLTEEEFLES YDASKYERPS VTVDMLIFTV TNEKKENYRK LPEKVLRLLM 
IKRADHPYIG QWALPGGFIK MDESLEEGAL RELKEETNID NIYMEQLYTW GDVNRDPRTR
IISVSYMALV DSSNLNIKAS DDADDAKWFT VSCNLYQEQK TLTEKGYILQ RLYNLRLSDE
EDNLSAVIKV VKTVEGRVSR VEREIVESHG IAFDHAKIIE YAVERLRNKI EYTDIAFNLM
PERFTLTELQ QVYEVILGRE LLKANFRRKI ANMVIETNEY TKDAGHRPSK LFRFNPNWND
ISE