Gene Cthe_3122 details

Gene Information

• Locus tag: Cthe_3122
• ID: 4809685
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3684732
• End bp: 3686810
• Gene Length: 2079 bp
• Protein Length: 692 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640108555
• Product: S-layer-like domain-containing protein
• Protein accession: YP_001039510
• Protein GI: 125975600

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTT TTAGGGGGAG GCTAATATCT TTAGCGCTTG TACTTGCAAT TATAATGCAA 
TTATTTGCAA ACTTTGCTTT TGCAGAGCCG ACCGAAAAGA ACACTATATT TTTCAGAGAC 
ATATCAGGAC ACTGGGCGGA AGAATCAATC AAGTACCTGG CAGAACGTGG CTTGGTAAAA 
GGCTATTTGA CTGACAACGG ATACATAATT AAACCTGATA CGTACATAAC AAGAGCTGAA 
TATCTTACCG TTCTTTTAAA TACAAAACCG AATCTCAAGG TTGTAAGTGA TAAAGTAAAA 
TTATTTGTTG ACGTAAAAGA TAATGATTGG TACAAAGAAG TGGTTGATAA AGCATCAAGT 
AATGGAATTC TCGAAGGATA TCCCGATGGA AGTTTCAAGC CTAATAATCC GATTACCAGG 
GCAGAAATTT CTGCGTTAAT GGTAAAAATC AACAATTGGA ACGAAAAGGA TATTACTGAG 
GATGCTGATG TGTTTTCTGA TGTTCAAAAG AATTCATGGT ACTATGCAGC TGTTTTAACG 
TGTAAGTTAA AGAAGATAAT AAATGGATAT CCGGATGGCA CTTTCAAACC GGGAAACTAT 
GCATCAAGAG CGGAAGCTTT TGCTTTGCTT GCAAATTATG TCAGGAATTT TATTGACAAG 
GATTTGGATG AAGAGCCTGA AAAAACTCCC GGTACAACTC ATGACGTGGT TTCACCGACT 
CCAAACCCTG GCACACCGTC TTTACCATCT TCCGGTTCCG GTTCAACAAT TGAAAAAGGG 
CCGTTTAAAG GTAAAACAGT TGATGACTTT TTATACGTAT CCGGCGGAGA CTTTAAAATT 
TTGAATGAAG AACAGAAAAA GATCACCTTT GAAGGTTTGG TTGACAAGGA AAATGTAAAA 
AAGATGTACT ACAATGTGGA ATACTATGGA TTCGACACGG ATACGCCCAA AATGGAAAAA 
AACAATATTA CAGACGGATT AATTATAGCA GGGCCTGATG AAGAAAACAA AGGAACATTT 
AATGAAAATC AAATCCCGTA CAGTTGGGTA CTTAAAGATT TTGAAGTTAA TAAGAGCTAT 
TTTAAGATTT ACATTAAACT GGTGATAGAA GACGAATACG GAAATAAACT TACTAAAATT 
TTGGCAATTA TAAATGATAA GGATTCTGAC GGGGATGGAT TGTCAGACTA TGAAGAGGTG 
TACATATATA ATACAAATCC GTTGAATTAC GATACAGATG GGGATAAACT TTCAGACTAT 
GAAGAAATTA ATATTTATGG AACAGATCCG TTAAATTCAG ATACAGATGA AGATGGTTTG 
ACGGATTATG AGGAAATGAA AGCATGGGTT ATTTTAGAAT TAGGTACAAT AGTATCAATT 
TTTTATAATG CTCCCGAATA CGAAGATATG GGAACTGAAG GCGTGGAGCT GGCAGCTGAA 
AAATTCGGCT ATAAAGAAGA GCAGATAATT TTGGGATTGG ATCCATTAAA TCCTGATACG 
GACGGAGACG GACTTCCTGA TGGCTATGAA TTCAGGATAT TGGGAACTGA TCCGACACGC 
AAAGTAACTT ATGGTGCGAA TGTGCCGGAT GTTGATCTTG ACATGGATAA AGACGGGCTT 
TCAAACTGGG ATGAATTTTT ATATGGAACG GATCCATGGT TAAAAGATAC AGATGGGGAC 
GGCATTAGTG ATTACGATGA GATTCGTACT TATAAAACAG ATCCATTAAA TCCTGATACA 
GACGGAGACG GGCTTGAAGA TGGATTGGAA CTGGAGCAGG GTTTTGATCC TCTAAAGTCT 
GATACCGGTA ACAGTGGTGT TTTGGATTCA GAAAAATTTG TCAGCATGAA TTTGTCCGAA 
GAAACTCTAA GTGACGTTTT GACTCCTGAA AACAGAGCAA TTCCTTCAAT AAAAGTGTTC 
GGCGTACCTG ATTTTGATAT TAATACTACT GTGGAAAATG CGTCTGAGCA TGAGAGTGTT 
AAAAACATTG TTGGCGTGGT GGGATTTCCT ATAGACATAA AAACTGATGA GGATTTTGAA 
AGTGCGCAGA TAAGTTTTAA AATAAGTGAA GAAGTTTAA 

 

Protein sequence

MSFFRGRLIS LALVLAIIMQ LFANFAFAEP TEKNTIFFRD ISGHWAEESI KYLAERGLVK 
GYLTDNGYII KPDTYITRAE YLTVLLNTKP NLKVVSDKVK LFVDVKDNDW YKEVVDKASS 
NGILEGYPDG SFKPNNPITR AEISALMVKI NNWNEKDITE DADVFSDVQK NSWYYAAVLT 
CKLKKIINGY PDGTFKPGNY ASRAEAFALL ANYVRNFIDK DLDEEPEKTP GTTHDVVSPT 
PNPGTPSLPS SGSGSTIEKG PFKGKTVDDF LYVSGGDFKI LNEEQKKITF EGLVDKENVK 
KMYYNVEYYG FDTDTPKMEK NNITDGLIIA GPDEENKGTF NENQIPYSWV LKDFEVNKSY 
FKIYIKLVIE DEYGNKLTKI LAIINDKDSD GDGLSDYEEV YIYNTNPLNY DTDGDKLSDY 
EEINIYGTDP LNSDTDEDGL TDYEEMKAWV ILELGTIVSI FYNAPEYEDM GTEGVELAAE 
KFGYKEEQII LGLDPLNPDT DGDGLPDGYE FRILGTDPTR KVTYGANVPD VDLDMDKDGL 
SNWDEFLYGT DPWLKDTDGD GISDYDEIRT YKTDPLNPDT DGDGLEDGLE LEQGFDPLKS 
DTGNSGVLDS EKFVSMNLSE ETLSDVLTPE NRAIPSIKVF GVPDFDINTT VENASEHESV 
KNIVGVVGFP IDIKTDEDFE SAQISFKISE EV