Gene Cthe_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3116 
Symbol 
ID4809679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3677281 
End bp3678372 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content39% 
IMG OID640108549 
Productmannose-6-phosphate isomerase, class I 
Protein accessionYP_001039504 
Protein GI125975594 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1482] Phosphomannose isomerase 
TIGRFAM ID[TIGR00218] mannose-6-phosphate isomerase, class I 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTATC CGTATAAAAT GACGCCTGTG TACAAGGACT ATATATGGGG TGGACACAAT 
CTCAAAAGGT TGGGAAAACC TGTAGTTGAG GGACGAGTGG CGGAAAGTTG GGAACTTTCT 
GCCATACCTG GAAGCGAAAC CAAAATTTCC AACGGTGTTT TACAAGGTCA GAGTATTGTT 
GATGTAATAA AAAAATACGG AAGAAAGAAA ATTCTTGGCG ATAAATTTGC TGCTGCACCG 
ATGAATACAG GATTCCCGCT TCTTTTGAAG TTCATTGACG CAAACGACCG CCTGTCCATT 
CAGGTTCATC CTGACAATGA ATATGCAAAA GAACACGAAC ACGGTGTGGG TAAAACCGAA 
ATGTGGTACA TAGTAGACGC CAAATCGGGA GCGACGGTTA TTCACGGATT TGCCGAAAGC 
TGTCAAAGCC CTGTAAAAAT TCGTGAATCT ATTTTAAAAG GCGAACACAG TGGATTGTAT 
AGAGAAATCC AGGTAAAAAA AGGCGATGTG GTTTTTGTAC CGGCGGGTAC CGTGCACGCA 
TTAAATGACG GTCTGGTAGT TGCTGAAATA CAGCAAAATT CAGATCTTAC ATACAGGATT 
TTTGACTATG ACAGGACTGA TTCCTATGGA AACAAAAGAC CTCTTCATGT GAATAAAGCA 
CTGGATGTGC TTTCTTTTCA AAATTCCAAA GCTTTGTATA AAGGAATTAC CGTATACCGT 
GATAATGGAA TAGAAACAAA GTATCTTGCC ATAAGTGAAT ATTTCTGTGT AAAAGAAATA 
AAGAGTGAGG GTGGAACCCT TGAATTAAAT CCGAAAGGTA CTTTTTCCGC ATTTATGTTT 
TTGGATGGTG AAGCCCAAAT AATATATGAT GAGGAGAAAT TGAAGATTAG TGCAATGGAA 
ACAGTTTTTA TTCCCGCGTA TATGGGCAAG TATAAAATCC GTGGTTCATT TTTGGCGCTT 
CATGTTTACG TGGCGGATTC TGCGTTGAAA GTTTATGATT CTTTAAGAAA TAAAGGCTTT 
TCCCATGAAG AAATAATTGA AAATGCAGCA GGGGCGGAAA ATCTCAAATT TCCTCTTAGA 
GTTGTAATAT GA
 
Protein sequence
MLYPYKMTPV YKDYIWGGHN LKRLGKPVVE GRVAESWELS AIPGSETKIS NGVLQGQSIV 
DVIKKYGRKK ILGDKFAAAP MNTGFPLLLK FIDANDRLSI QVHPDNEYAK EHEHGVGKTE 
MWYIVDAKSG ATVIHGFAES CQSPVKIRES ILKGEHSGLY REIQVKKGDV VFVPAGTVHA 
LNDGLVVAEI QQNSDLTYRI FDYDRTDSYG NKRPLHVNKA LDVLSFQNSK ALYKGITVYR 
DNGIETKYLA ISEYFCVKEI KSEGGTLELN PKGTFSAFMF LDGEAQIIYD EEKLKISAME 
TVFIPAYMGK YKIRGSFLAL HVYVADSALK VYDSLRNKGF SHEEIIENAA GAENLKFPLR 
VVI