| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3101 |
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| Symbol | |
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| ID | 4809727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3657482 |
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| End bp | 3658714 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640108529 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | YP_001039489 |
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| Protein GI | 125975579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTA TTAATGAAAA TTATCTTAAG CTTCCGGGAA GCTACCTTTT TTCTGAAATT
GCGAGGAGAG TGGACAATTT CAGAAAGGAA AATCCCAATG CAAAAATAAT ACGGCTGGGT
ATTGGAGATG TTACAAAGCC GTTGGCGCCG GCAGTTATTG ACGCTTTGCA CAAAGCGGTG
GACGAAATGG CAAAAGAGGA GACTTTTAAA GGATACGGAC CGGAGCAAGG TTATAGCTTC
TTAGTCAGCA AAATAATTGA ATATGACTAT ATGCCCCGGG GAATCAGGCT TGATGAGGAC
GAGGTTTTTG TAAGCGACGG GGCGAAAAGT GATACTGGAA ATTTCCAGGA GATATTTGGC
CTGGACAACA AAGTTGCCGT TACCGACCCT GTATATCCTG TTTATGTTGA CAGCAATGTT
ATGGCAGGAA GGACCGGAAA GTATCTTGCG AATGGTTATT TTGAGAATAT AACCTATCTT
CCGTGTACTG CCGAAAACAA TTTCATTCCT GAACTTCCAA AAGAGAAAGT GGATATTATT
TACCTTTGTT TCCCAAATAA TCCGACGGGA ATGACCTTGT CTAGGGAAGA ACTTAAAAAG
TGGGTCGACT ATGCAAGGGA AAACCGCGCG ATAATACTGT TTGACTCGGC ATACGAGGCG
TATATCCGTG AGAAAGATGT GCCCCACAGC ATTTATGAGG TTGAGGGAGC AGATGAGGTG
GCAATTGAGT TTAGAAGCTT TTCCAAGACG GCAGGTTTTA CCGGAACAAG GTGTGCGTAT
ACCGTAGTTC CCAAAAAGGT TGTGGCTTAT ACCAAAAACG GAGAAGCGCA TCAGCTCAAC
AGCCTTTGGA ACAGAAGACA GACAACAAAA TTCAACGGTG TTCCGTATAT TATACAGCGG
GCAGCGGCGG CGGTTTATAC CCCGGAGGGA CAAAAACAGA CTAAAGAAAC CATAGACTAT
TACATGGAAA ATGCAAAAAT AATCAAACAA GGTTTGGAGG ATATCGGGCT TACCGTATTT
GGAGGAGTAA ATGCTCCGTA TATCTGGCTT AAGACTCCGG ATGGCATAAG TTCATGGGAA
TTTTTTGATA TCATGCTAAA AGAAATAAAT GTTGTCGGAA CACCCGGTTC AGGATTCGGA
CCGAGCGGAG AAGGATATTT CCGGTTAACC GCTTTCGGAA GCAGGGAGAA TACTCTTGAG
GCTGTGGAAA GATTTAAAAA TTTGAAATTT TAG
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| Protein sequence | MAFINENYLK LPGSYLFSEI ARRVDNFRKE NPNAKIIRLG IGDVTKPLAP AVIDALHKAV
DEMAKEETFK GYGPEQGYSF LVSKIIEYDY MPRGIRLDED EVFVSDGAKS DTGNFQEIFG
LDNKVAVTDP VYPVYVDSNV MAGRTGKYLA NGYFENITYL PCTAENNFIP ELPKEKVDII
YLCFPNNPTG MTLSREELKK WVDYARENRA IILFDSAYEA YIREKDVPHS IYEVEGADEV
AIEFRSFSKT AGFTGTRCAY TVVPKKVVAY TKNGEAHQLN SLWNRRQTTK FNGVPYIIQR
AAAAVYTPEG QKQTKETIDY YMENAKIIKQ GLEDIGLTVF GGVNAPYIWL KTPDGISSWE
FFDIMLKEIN VVGTPGSGFG PSGEGYFRLT AFGSRENTLE AVERFKNLKF
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