Gene Cthe_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3089 
Symbol 
ID4809963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3643649 
End bp3644041 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content36% 
IMG OID640108512 
Producthypothetical protein 
Protein accessionYP_001039477 
Protein GI125975567 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000330807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTCAC CTCAGAACAT TTTAGTTTGT GTAACTCAGC AGATTACTTG CGAAAGACTT 
ATACTAAAAG CCGCAGAATT AAGAAACGAA TTAAAGGGCG AACTCTTTGT CATACATGTT
GCAAAAAATG AATGGAACTT CCTGGACAAC ATAAAGGAGG GAGAGGCTTT AGAATACTTG
TTTAAAATAT CAAAATCGGT CGGTGCAAAC CTTTCAGTGT TAAAATCCGA TGATATTGTT
CAAACCATAG TGAATTTTGC AAAGGAAAAT AAAATTACCC ATATTGTAAT GGGAGAGTCC
CCTAATGACC ACAAGGAAAA CAATTTTTAC AATGAACTGA AGAGACTTTT AAGTAATGTT
GAGATTCTTG TCATACCCCA GGCCGGAATC TGA
 
Protein sequence
MSSPQNILVC VTQQITCERL ILKAAELRNE LKGELFVIHV AKNEWNFLDN IKEGEALEYL 
FKISKSVGAN LSVLKSDDIV QTIVNFAKEN KITHIVMGES PNDHKENNFY NELKRLLSNV
EILVIPQAGI