| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3072 |
|---|
| Symbol | |
|---|
| ID | 4809946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 3612982 |
|---|
| End bp | 3613743 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640108496 |
|---|
| Product | acyl-ACP thioesterase |
|---|
| Protein accession | YP_001039461 |
|---|
| Protein GI | 125975551 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3884] Acyl-ACP thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000895181 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGA AAAGATTTTC AAAGAAGTAT GAAGTACATT ACTACGAAAT CAACTCAATG
CAGGAAGCAA CTCTTCTCTC CCTGCTAAAC TATATGGAGG ACTGCGCAAT ATCCCACTCA
ACCTCTGCCG GATACGGTGT CAACGAGTTA TTGGCTGCTG ACGCAGGATG GGTATTATAC
CGCTGGTTAA TTAAAATAGA CAGACTTCCC AAGCTCGGAG AAACAATTAC TGTTCAGACA
TGGGCCTCTT CCTTCGAACG CTTCTACGGC AACAGGGAAT TTATCGTATT GGACGGCAGG
GATAACCCCA TTGTCAAAGC CTCATCCGTA TGGATATATT TCAATATTAA AAAAAGAAAA
CCTATGAGAA TCCCCCTCGA AATGGGAGAT GCTTATGGCA TAGACGAAAC AAGAGCTTTG
GAAGAACCCT TTACCGACTT CGATTTTGAT TTTGAACCCA AAGTTATTGA AGAATTTACT
GTAAAAAGAA GTGATATAGA CACAAACAGC CACGTAAACA ACAAGAAATA CGTTGACTGG
ATTATGGAAA CCGTACCCCA GCAAATATAT GACAACTACA AAGTTACATC TCTTCAGATT
ATATACAAAA AGGAATCTTC TTTGGGTTCA GGCATAAAGG CCGGATGTGT AATTGATGAG
CAAAATACCG ATAATCCGCG GCTCCTTCAC AAAATATGGG ACAAGAATAC CGGTTTGGAG
CTTGTATCCG CCGAAACAAT CTGGCAAAAG ATTCAGTCAT AA
|
|---|
| Protein sequence | MQKKRFSKKY EVHYYEINSM QEATLLSLLN YMEDCAISHS TSAGYGVNEL LAADAGWVLY
RWLIKIDRLP KLGETITVQT WASSFERFYG NREFIVLDGR DNPIVKASSV WIYFNIKKRK
PMRIPLEMGD AYGIDETRAL EEPFTDFDFD FEPKVIEEFT VKRSDIDTNS HVNNKKYVDW
IMETVPQQIY DNYKVTSLQI IYKKESSLGS GIKAGCVIDE QNTDNPRLLH KIWDKNTGLE
LVSAETIWQK IQS
|
|---|
| |