| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3068 |
|---|
| Symbol | |
|---|
| ID | 4809942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3609155 |
|---|
| End bp | 3610594 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640108492 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001039457 |
|---|
| Protein GI | 125975547 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000279575 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA AAAAACGCCT TATTTTTTCG AATGCTGCAA TTATTGTTAT TCCTCTTGGG
ATAACATTTG TGGCATCTTT TATTTTTATG TTTGTTTTGG CGAGGATACA TGATGTCGAC
CTAAGTTACA ATAATGTAAA AAAGCTTACT CAGATACAAT ACGAGTTTTT TAAAGCAGAG
GGGGGATTGC TTAAAAATTC CCCGGAAATA ATTTTGGAAA AAGATTTTCA GCAGTATATT
ACCACAAGAC TTGAGAGCAT AGAAGCCGAC ATAGTGGTGC TAAAAGGCCA GGAACGGGTT
TTTGAAACTC GCAAGCTCAG TATTATTGAG TTGGAAAGAT GTCTTGAAAA AACCGGCGAC
AACTTGTTTA GAAACATTGT TGAGATTCAG GGCAAATCCC ATATGGTAAA AGTAATACCT
GTGATATTTA AAAGCGGTGA GGATGGGAAA ATTCTTTTGC TTGTGCCCGC CGTAAATGAC
TGGATGACAA CGGAAAAGCT TTTCATATTT TCCGGCGTGG TGTTTGTTCT CAGCTTTATA
ATAACAAATA TAGTCATCAT TACTGCTTTT TCAAAGAAAG TTATAACTCC TCTGGGGAAG
CTTCAGGCTG CTGCGGGCAA AATAAGCGAA GGCAATCTGG ATTTTGAGAT TATTGAGGAC
GGAGATACCC AAATTAGAGA ATTGTGCCGC TCCTTTGAGA AAATGAGGCT TAAGCTTGTG
GAGGCAAATT ATACGCAGAA AAAATATGAT GAGAGCAGAA AAATGCTTTT TTCAAGCATA
TCTCACGATC TTAAAACTCC TATAACTTCA ATAAAGGGAT ATGTTGAGGG GATATTGGAC
GGTGTGGCAA ATACCCCTCA GAAAGTGGAA AAATATTTAA GAACGGTTCA TTCCAAGGCT
GTTCACATGG ATAGAATGAT TGATGACCTT CTTTTGTATT CGAGACTGGA TATGCACAAG
GTTTCGTTTA ATTTTGAAAA GACGGATGTG CTAAAGTACT TTGAAGATTG CATGTATGAA
ATAGATATTG AACTTGAAAA GTCCAATATC AAGGTTGAGC TTCATAACAA CTTGAGAGGA
AAGCGTTATA TAATGATAGA CAGGGATCAG GTGCGAAGAG TTGTGATAAA CATAATTGAC
AACTCAAGAA AATATATGGA CAAGGAACAG GGGAAAATAG ATATTTTTTT GAGGGAAGCA
ACATCAAATG TGGTAATAGA GATAAAAGAC AACGGAGCCG GAATTAGTGA AAGTGATTTG
CCCTACATTT TTGACAGGTT CTATCGCGCC GATTCGGCGA GGGATACCAG GAAAGGAAGC
GGGCTTGGAC TTGCCATTGC CAAACAAATA ATAGAAGGAC ACGGAGGGAA AATTTGGGCG
GTCAGCCGTA TGGGCGAAGG CACGAGTGTG ATGATTTCTC TGAAAAAATA TGAAGGCTGA
|
|---|
| Protein sequence | MDLKKRLIFS NAAIIVIPLG ITFVASFIFM FVLARIHDVD LSYNNVKKLT QIQYEFFKAE
GGLLKNSPEI ILEKDFQQYI TTRLESIEAD IVVLKGQERV FETRKLSIIE LERCLEKTGD
NLFRNIVEIQ GKSHMVKVIP VIFKSGEDGK ILLLVPAVND WMTTEKLFIF SGVVFVLSFI
ITNIVIITAF SKKVITPLGK LQAAAGKISE GNLDFEIIED GDTQIRELCR SFEKMRLKLV
EANYTQKKYD ESRKMLFSSI SHDLKTPITS IKGYVEGILD GVANTPQKVE KYLRTVHSKA
VHMDRMIDDL LLYSRLDMHK VSFNFEKTDV LKYFEDCMYE IDIELEKSNI KVELHNNLRG
KRYIMIDRDQ VRRVVINIID NSRKYMDKEQ GKIDIFLREA TSNVVIEIKD NGAGISESDL
PYIFDRFYRA DSARDTRKGS GLGLAIAKQI IEGHGGKIWA VSRMGEGTSV MISLKKYEG
|
|---|
| |