Gene Cthe_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3048 
Symbol 
ID4811120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3573876 
End bp3574541 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID640108469 
ProductDNA repair protein RadC 
Protein accessionYP_001039437 
Protein GI125975527 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000000891178 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAAA TCAGTGAAAT GCCCAAGTTT GAAAGACCAA GGGAAAAGCT TCTGGAAAGG 
GGAGTTGGAT ATCTTTCGGA CTTGGAATTG CTTGCAGTTT TAATTGGAAA CGGTACAAAA 
GATTGCAGTG TGATGAATGT TGCCGGAAAG GTACTAAAGC TTTTGGACAA AGGCTGTGAC 
AGGGTGAGTG CCAGGGTGCT TCAGGAAATC GAGGGGGTCG GTCCGGCAAA ATCAGCGGTT 
ATTGCCGCGG CTCTTGAGTT TGCGAGGCGC AGAATAAGAC CGGAGGGAAT AAAAATAACT 
TCTGCTTGTG ATATATTGCC TTTGATTTCA TACTTGGCAA ACCGCAAACA GGAACATTTT 
GTTTGTGTCT CATTAAACGG CGCCAGTGAA GTTATTGCCA CAAGGGTGGT GTCGGTTGGA 
CTGGTTAACA ATGTGCAGGT GCATCCAAGG GAGGTATTTG CCGACCCTAT AACTGACAGG 
GCAACAGCGG TCATAGTGGC TCATAATCAC CCGTCGGGTT CTGTTGCTCC GAGTCAGGAG 
GATATAGAGG TGACAAAGCG TCTTAAAGAT GCCGGCAACA CTCTGGGGAT AAAGCTTATA 
GATCATATAA TTTTCAGCCG CAAGGGTTAT TTCAGCTTCC TTGAAAACGG GCAGATGCCT 
GATTAA
 
Protein sequence
MRKISEMPKF ERPREKLLER GVGYLSDLEL LAVLIGNGTK DCSVMNVAGK VLKLLDKGCD 
RVSARVLQEI EGVGPAKSAV IAAALEFARR RIRPEGIKIT SACDILPLIS YLANRKQEHF 
VCVSLNGASE VIATRVVSVG LVNNVQVHPR EVFADPITDR ATAVIVAHNH PSGSVAPSQE 
DIEVTKRLKD AGNTLGIKLI DHIIFSRKGY FSFLENGQMP D