| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3024 |
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| Symbol | |
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| ID | 4811096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3546060 |
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| End bp | 3547970 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640108445 |
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| Product | ech hydrogenase subunit A |
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| Protein accession | YP_001039413 |
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| Protein GI | 125975503 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000133717 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAA TTTTAATATT GATATTGTTT CCGCTGTTGG CATCTGTCAC TGTTTTGTCA
GTAAGAAAAG ATGCCATAAG AAATATAATA GTAAGAATTT TCGCCTTTAT TACCGGCATA
CTGACATTAT TTGTGGTATG TCGGTATTTT AAGGATGGAA TATCTTTGTC CATTGAAAAC
AGGAATATTA TTGACATGAC CATATCTCTG GCGGAGGTCC TTATTGCTGC ATATATAATA
TTTACAGGCA TAAAAAACAA AAAGTTCATT GTATCAATTT TTGCAGCTGT TCAAACCGCT
CTGATTCTTT GGTTTGAATT TACACAAAAA CACGGTATCA ATGTTCATTC GGACATTGTA
TTCGACAGGC TTTCCGCTGT TATGGTCCTC ATTGTGGGAT GTATCGGAAG CCTTATACTG
ATATACACTG TCGGATATAT GAAATGGTAT CACATACACC ACGAAGGATA CAAAGAAAGA
AAGAGTTTCT TTTTTTCTGT AATTTTTCTC TTTCTCTTTG CAATGTTCGG ATTAATTTTC
AGCAACAACC TGATCTGGAT GTATTTTTGC TGGGAACTTA CAACCTTGTG TTCTTACCTT
CTTATCGGTT ACACCCGAAC ACCCGAAGCA GTAAACAATT CATTCCATGC ATTGGCAATC
AATCTTGGCG GCGGACTTGC GTTTGCGTCG GCAATGGTAT ATATAGGAAC GAACTTTAAA
ACTCTCGAGC TTTCGGCATT GACAGCCATG AAACTTGAGC TTGCGGTTCT CATACCGGTT
TTCCTTCTTT GTATTGCAGC CCTTACGAAG TCTGCCCAGA TGCCCTTTTC CTCCTGGCTT
TTGGGGGCAA TGGTAGCACC GACTCCGTCA TCGGCGCTTT TGCACTCGGC AACAATGGTA
AAAGCAGGAG TTTACCTTTT AATAAGACTT GCTCCGCTGC TTGCAGGAAC TACCATAGGA
AAAGTAATTG CTCTTTTGGG AGCGGTTACG TTCCTGGCAA GTTCCATCAT CGCAATCTCC
AAAAGCGACG CAAAGAAAAT TCTGGCTTAT TCAACCATAT CGAATTTAGG ACTTATAGTT
ACCTGCGCAG CCATAGGAAC GCAGGAATCG CTGTGGGCAG CAATACTGCT GTTAATATTC
CACTCCATAT CCAAATCCCT TCTGTTCCTG ACCGGAGGCT CAGTAGAGCA CCAGATAGGA
AGCCGCAATG TTGAGGATAT GGATATTCTT CTGCAGGTGT CAAGAAGGCT GTCTGTATAT
ATGATTGTGG GAATAGCCGG AATGTTCCTT GCCCCCTTTG GAATGCTTAT ATCCAAATGG
GTTGCCATGA AGGCATTTAT TGATTCGAAG AATATACTTA CAGTTATCAT TTTGGGATAC
GGCAGTGCCA CAACACTGTT CTACTGGACA AAATGGATGG GTAAACTCGT AGCCAATGCC
AACAGAAAAG ACCACATAAA GCATACCTTC CACATAGACG AGGAAATTCC TATTTTTATC
CATGCAGTCC TTGTGGTATT GTCCTGCTTT ACTTTTCCTC TGGTATCCCG ATATGTACTT
GTACCGTATC TTTCAGGTCT GTTTGGTCCG GATGTGCCAA TTCCTATCGG AACAAGTGAT
GTAAATATAA TGCTTATAAT GCTAAGTATG CTGTTAATAC TGCCAATAAG CTTTATTCCA
ATATATAAAA GCGACCGGCG CAGGATAGTG CCTATTTACA TGGCCGGGGA GAACACCGGC
GACAATGAGA GTTTTTATGG TGCTTTTGAT GAAAAACGTA AAGTCGAGCT CCACAACTGG
TATATGAAAA ACTTTTTCTC TGTGAAAAAA CTAACCTTCT GGAGTAATTT ACTATGTGCC
GTTGTGATAT TGGTGGGCGT AGTACTTTTA ATAGGAGGAA TTACCAAATG A
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| Protein sequence | MNAILILILF PLLASVTVLS VRKDAIRNII VRIFAFITGI LTLFVVCRYF KDGISLSIEN
RNIIDMTISL AEVLIAAYII FTGIKNKKFI VSIFAAVQTA LILWFEFTQK HGINVHSDIV
FDRLSAVMVL IVGCIGSLIL IYTVGYMKWY HIHHEGYKER KSFFFSVIFL FLFAMFGLIF
SNNLIWMYFC WELTTLCSYL LIGYTRTPEA VNNSFHALAI NLGGGLAFAS AMVYIGTNFK
TLELSALTAM KLELAVLIPV FLLCIAALTK SAQMPFSSWL LGAMVAPTPS SALLHSATMV
KAGVYLLIRL APLLAGTTIG KVIALLGAVT FLASSIIAIS KSDAKKILAY STISNLGLIV
TCAAIGTQES LWAAILLLIF HSISKSLLFL TGGSVEHQIG SRNVEDMDIL LQVSRRLSVY
MIVGIAGMFL APFGMLISKW VAMKAFIDSK NILTVIILGY GSATTLFYWT KWMGKLVANA
NRKDHIKHTF HIDEEIPIFI HAVLVVLSCF TFPLVSRYVL VPYLSGLFGP DVPIPIGTSD
VNIMLIMLSM LLILPISFIP IYKSDRRRIV PIYMAGENTG DNESFYGAFD EKRKVELHNW
YMKNFFSVKK LTFWSNLLCA VVILVGVVLL IGGITK
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