Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3023 |
Symbol | |
ID | 4811095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 3545188 |
End bp | 3546063 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640108444 |
Product | ech hydrogenase subunit B |
Protein accession | YP_001039412 |
Protein GI | 125975502 |
COG category | [C] Energy production and conversion |
COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0539405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAA TAATAAGGCT GGTTTTATAT ATAATTGCAA TTATTATCGT GGCACCTCTG CTTGGCGGGC TTCTAACCGG GATTGACAGG GTAATAACCG CAAGAATGCA GGGAAGAAAA GGGCCTTCGG TGCTTCAGCC TTTTTATGAT GTATTAAAAC TCTTTCAGAA AGAATCAATA GAAGTTAACA CCATGCATCG CTTTTTTGTC TATATATCTC TGATATTCGT TATTTTCACG ACGGTTATCA TGCTGTTGGG AGGAGACATA CTGCTTGCTT TGTTTGCATT GACATTGGGC TCCATATTTT TTGTGCTGGG TGGTTACGCA TCAAATTCCC CATACAGTAC CATTGGTTCG GAAAGAGAGC TTCTCCAAAT GATGGCCTTT GAGCCTATGC TTTTGCTTGC AGCCATTGGA CTGTATTACG GGGACAAGAG CTTTTTTATA AAAGATATAG TTACGGCCCG CATTCCTTCA ATTGTTTATC TTCCGGGAGT TTTTTTGGGA CTGTTGTACG TATTGACTTT CAAACTTAGA AAATCCCCAT TTGATTTAAG TATGTCGCAC CACGGCCACC AGGAAATTGT ACAAGGCATA ACAACAGAGT ATTCAGGAAA AGATTTGGCG ATAATACAAA TAACCCACTG GTATGAAACA ATAATTGCAC TGGCCCTTGT ATACTTGTTT TTTGCCTTCA GGTCACCGTT CAGCCATGTT ATTGCAATCT TAGCCTGCAT TATCGCTTTC CTTCTGGAAA TTGTCGTAGA CAATGCTTTT GCACGGGCCA AGTGGGAGTT TGCACTCAAA TCAACCTGGA TTGTAACAGG GGTTTTGGCA TCAGTAAATC TTATTATTTT ATCATTTTTT AGGTAA
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Protein sequence | MSQIIRLVLY IIAIIIVAPL LGGLLTGIDR VITARMQGRK GPSVLQPFYD VLKLFQKESI EVNTMHRFFV YISLIFVIFT TVIMLLGGDI LLALFALTLG SIFFVLGGYA SNSPYSTIGS ERELLQMMAF EPMLLLAAIG LYYGDKSFFI KDIVTARIPS IVYLPGVFLG LLYVLTFKLR KSPFDLSMSH HGHQEIVQGI TTEYSGKDLA IIQITHWYET IIALALVYLF FAFRSPFSHV IAILACIIAF LLEIVVDNAF ARAKWEFALK STWIVTGVLA SVNLIILSFF R
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