Gene Cthe_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3018 
Symbol 
ID4811166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3542347 
End bp3542685 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content41% 
IMG OID640108439 
Producthydrogenase expression/synthesis, HypA 
Protein accessionYP_001039407 
Protein GI125975497 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAGT ACCCGATAAC AAAGAGAATA ATCGAAATAT CGCAGGAGCA TGCTAATAAA 
CACAACGCCA AAGAAGTAAA ACAAATCAAC CTGGTGGTGG GCGATTATTC CGGCTATGTG
GCCAGCTCCA TAGAACTGTA CTTCGGAATT ATTGCGGAAG GAACCGTATG TGAAAATGCA
AAACTTAACA TCAAGCGCGT AAAACCAATG TTAAAATGCA ATGAATGTGA AAGCCTCTTT
GTGAGGAAAC CTTTTTCTTT CGAGTGTCCT TACTGTGGCG GTCAGGGAAG TCCGACCGAG
ATAGGACACG AATTTTATAT AGAATCGATA GAAATTTAG
 
Protein sequence
MHEYPITKRI IEISQEHANK HNAKEVKQIN LVVGDYSGYV ASSIELYFGI IAEGTVCENA 
KLNIKRVKPM LKCNECESLF VRKPFSFECP YCGGQGSPTE IGHEFYIESI EI