| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3014 |
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| Symbol | |
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| ID | 4811162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3538175 |
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| End bp | 3539224 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640108435 |
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| Product | hydrogenase formation HypD protein |
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| Protein accession | YP_001039403 |
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| Protein GI | 125975493 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGC TTGAAGCTAT AAAAAAGGAG CTTGGAGAAT ACGAGGGCAA AAACATTAAA
ATAATGGAAG TCTGCGGCAC CCACACTTCC AGCATTTTTA AGAACGGGAT CCGAAGCCTT
ATCTCCCCTC GTATACAGCT TATTTCGGGA CCGGGCTGCC CTGTATGCGT GACGGCCTCA
TCCTACATTG ACAGGCTTGT AGAATATTCT CTAAAGGACA ACCATTGTGT TTTGACTTTC
GGTGACATGA TGAAGGTAAA GGGACACAAA CTTTCTCTTA CCGAGGCAAA AGCAACGGGG
GGAAATGTAA AAATCCTCTA TTCTCCCCTC AGTGCGGTAA AAATTGCAAT CAAAAGCCCT
GAGACCCAAT TTATTTTTGC CGCAGTGGGG TTTGAGACCA CAGCCCCTAT TTATGCGCTG
ATGATTGAAG AAATAATTAA GAATAATATA AAAAACCTGA AACTGATGAC TTCGATTAAG
ACCATTATAC CTGCGATTTC ATATATTTGC GAAAATGAAA AAAATATAGA CGCTTTTCTC
TGCCCCGGTC ATGTCAGTGT TATCATCGGC TCCTCGGTTT ATACCGATAT GGCGTTAAAA
TACCGCAAGC CTTTTGTGAT AGGCGGTTTC GAGGGTGGGC ATATTATAGC GGCAATTTAT
GAAATAATCC GCCAGATTTC AAACAATGAA TACAGTATGA AAAACATGTA TCAAAGTGCT
GTAAGCCCTG AGGGAAATCA AAAGGCGAAA TCTTTGATTG ACAAATATTT TGAAGCTGCA
GACGACTATT GGCGGGGAAT CGGAATAATA AAAAACTCGG GGCTAAGGCT AAGAACGGAA
TACAGGGATT TTGATGCCGG GAGCACAATT TTTGAAGATG CTGACGCTGC ACCTTCGGGC
TGTAAATGTG CTGATGTAAT ACTGGGAAGA ATAACCCCTG CACAATGCCC TCTGTTCGGC
AAGGCCTGCA CTCCGTTAAA TGCCGTCGGA GCATGCATGG TTTCTTCAGA GGGCGCCTGC
GGAATCTGGT ACAGAAATTG TGAGGTGTAG
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| Protein sequence | MKTLEAIKKE LGEYEGKNIK IMEVCGTHTS SIFKNGIRSL ISPRIQLISG PGCPVCVTAS
SYIDRLVEYS LKDNHCVLTF GDMMKVKGHK LSLTEAKATG GNVKILYSPL SAVKIAIKSP
ETQFIFAAVG FETTAPIYAL MIEEIIKNNI KNLKLMTSIK TIIPAISYIC ENEKNIDAFL
CPGHVSVIIG SSVYTDMALK YRKPFVIGGF EGGHIIAAIY EIIRQISNNE YSMKNMYQSA
VSPEGNQKAK SLIDKYFEAA DDYWRGIGII KNSGLRLRTE YRDFDAGSTI FEDADAAPSG
CKCADVILGR ITPAQCPLFG KACTPLNAVG ACMVSSEGAC GIWYRNCEV
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