| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3012 |
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| Symbol | |
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| ID | 4811160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3535136 |
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| End bp | 3537028 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640108433 |
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| Product | carbohydrate-binding family 6 protein |
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| Protein accession | YP_001039401 |
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| Protein GI | 125975491 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAGT TAAGAAAATT GCTGCTATTT TCTACTGTTT TGTTTGTCGT TTTTACTCAA
CTATTTGGCT TTATAATCAC GGTAGATGCG GCAGAAACGG CAACAATCAA CTTGTCGGCG
GAAAAACAGG TAATCCGCGG ATTTGGAGGA ATGAACCATC CCGTTTGGAT TTCCGACCTG
ACGCCGCAGC AAAGGGATAC GGCTTTTGGT AATGGAGAGG GACAGCTGGG CTTTACTATT
TTGAGAATTC ATGTCGATGA GAACAGAAAC AATTGGTCAA AAGAAGTGGC AACCGCCAGA
AGAGCTATTG AGCTTGGAGC AATAGTTTTT GCTTCTCCGT GGAATCCTCC AAGTAATATG
GTGGAGACCT TCACTCGTAA CGGTGTGCCA AATCAAAAGA GACTCAGATA TGATAAATAC
GGAGATTATG TACAGCATCT TAACGACTTT GTTGCGTACA TGAAAAGTAA CGGAGTGGAT
TTGTATGCCA TTTCAGTTCA GAACGAACCA GACTATGCCC ATGAGTGGAC ATGGTGGACT
CCTCAGGAAA TGCTTCGCTT TATGAGGGAC TATGCCGGCC AAATCAACTG CAGGGTTATG
GCGCCGGAGT CATTCCAATA TCTGAAAAAT ATGTCCGACC CGATTTTGAA TGACCCTCAG
GCTCTTGCGA ATTTGGATAT ACTTGGTGCC CACTTTTACG GCACTACTGT AAACAATATG
CCCTATCCTT TGTTTGAGCA AAAAGGAGCG GGAAAAGAGC TGTGGATGAC AGAGGTTTAT
GTTCCAAACA GCGACAGCAA TTCGGCAGAC CGCTGGCCTG AGGCACTAGA GGTTGCGCAT
AATATGCACA ATGCTTTGGT AGAGGGAAAT TTCCAGGCAT ATGTTTGGTG GTATATCCGC
AGGTCATACG GACCTATGAA AGAAGACGGT ACTATAAGCA AGCGCGGATA TATGATGGCA
CATTACTCAA AGTTTGTCCG CCCGGGATAT GTAAGGGTTG ATGCAACGAA AAATCCTACA
TACAATGTAT ATTTATCTGC TTACAAAAAC AAAAAAGATA ACAGCGTTGT GGCAGTGGTT
ATAAATAAAA GTACCGAGGC GAAGACAATT AATATATCCG TTCCGGGAAC AAGTATCAGA
AAGTGGGAAA GATATGTTAC TACAGGGTCA AAAAATCTTA GGAAAGAATC AGACATAAAT
GCAAGTGGAA CCACTTTCCA GGTTACTTTG GAGCCTCAAA GCGTTACAAC TTTTGTAGGC
GGTGGATCCA GTGAACCGCA AATACCGGTT GAAAGAAATG CTTTCTCAAA GATAGAATGC
GAAGAATATA ACGCTACCAA TTCTTCCACT GTACAAGTAG TGGGTACCGG CACAGGAAGC
GGTCTCGGAT ATATCGAAAA CGGCAACTAT TTTGCTTACA AAAATATTAA TTTCGGTAAC
GGTGCAAATT CATTCAAAAT CAGGGCTGCA ACTACCGGTA CTCCAAAAAT AGAAATCCGA
CTGGGCAGTC CGACAGGCAC TCTTGCAGGT ACATTGCAAG TGGCTGCAAC CGGAGGCTTT
AATGCCTATG AGGAGCAGAG CTGCAGTATT AATAAAATTA CGGGTGTCCA GGACGTCTAT
TTGGTATTCG GAGGAGCTGT AAATGTTGAC TGGTTTACCT TTGAGTCAAA ACAGGAGCCG
ACTTTCAAGT ACGGCGACCT CAACGGTGAC GGCAATGTTA ACTCCACTGA TTCCACGCTT
ATGTCAAGAT ATCTTTTAGG TATAATCACC ACTTTGCCGG CCGGTGAAAA GGCTGCGGAT
TTGAATGGGG ACGGAAAGGT AAATTCTACA GACTACAATA TTTTAAAGAG ATATTTGCTT
AAATATATTG ATAAATTTCC TGTAGAATCA TAA
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| Protein sequence | MRKLRKLLLF STVLFVVFTQ LFGFIITVDA AETATINLSA EKQVIRGFGG MNHPVWISDL
TPQQRDTAFG NGEGQLGFTI LRIHVDENRN NWSKEVATAR RAIELGAIVF ASPWNPPSNM
VETFTRNGVP NQKRLRYDKY GDYVQHLNDF VAYMKSNGVD LYAISVQNEP DYAHEWTWWT
PQEMLRFMRD YAGQINCRVM APESFQYLKN MSDPILNDPQ ALANLDILGA HFYGTTVNNM
PYPLFEQKGA GKELWMTEVY VPNSDSNSAD RWPEALEVAH NMHNALVEGN FQAYVWWYIR
RSYGPMKEDG TISKRGYMMA HYSKFVRPGY VRVDATKNPT YNVYLSAYKN KKDNSVVAVV
INKSTEAKTI NISVPGTSIR KWERYVTTGS KNLRKESDIN ASGTTFQVTL EPQSVTTFVG
GGSSEPQIPV ERNAFSKIEC EEYNATNSST VQVVGTGTGS GLGYIENGNY FAYKNINFGN
GANSFKIRAA TTGTPKIEIR LGSPTGTLAG TLQVAATGGF NAYEEQSCSI NKITGVQDVY
LVFGGAVNVD WFTFESKQEP TFKYGDLNGD GNVNSTDSTL MSRYLLGIIT TLPAGEKAAD
LNGDGKVNST DYNILKRYLL KYIDKFPVES
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