Gene Cthe_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3008 
Symbol 
ID4811156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp3531917 
End bp3532588 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID640108429 
Productsuperoxide dismutase 
Protein accessionYP_001039397 
Protein GI125975487 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTATG CAATGATGTC CATAGCACCC GGACAGCATC GGTTGCCACC TCTACCCTAC 
CCTTACAATG CATTGGAGCC TGTAATCAGT GCGGAGGCTT TAAGAATTCA TCACGACATG 
CACCACAAGG CTTATGTCGA TGGCCTGAAC AGGGCGGAAA TCAACCTGGT GGAAGCGCGG 
AAAAACAATG ACTTCAAATA TATAAAATAC TGGGAAAATC AGTTGGCCTT CAACGGTTCC 
GGTCATATTC TCCACAGCAT TTTCTGGACT GTCATGGCAC CTCCGGGAAG AGGAGGTAAG 
CCCGGCATTC ACACTACAAA CCAGATAAAC AGCTATTTTG GAAGCTTCAA CGCGTTTGCG 
GAGCAGTTTA AAAGCGCCGC TGAAAATGTG GAAGCATCCG GATGGGGAAT TCTGACCTGG 
CAGCCGACAT GGAGAAGGCT TGAAATTTTG CAGGCGGAAA AGCATCAGGA TTTAACACAG 
TGGAGCGGAA TTCCCATTTT GGTATGCGAT GTCTGGGAAC ATGCCTATTA CCTGGATTAT 
CAGAACAGGC GAAAGGAATA TATAAGCCGA TGGTGGGACT TAATCAACTG GCATGAAGTT 
GAAAGACGGC TTCTTTTGGC AATGAACGGT CAGGTGCCCC TCACTGTTAT GAATAATTAT 
TGGCTGGCTT AA
 
Protein sequence
MQYAMMSIAP GQHRLPPLPY PYNALEPVIS AEALRIHHDM HHKAYVDGLN RAEINLVEAR 
KNNDFKYIKY WENQLAFNGS GHILHSIFWT VMAPPGRGGK PGIHTTNQIN SYFGSFNAFA 
EQFKSAAENV EASGWGILTW QPTWRRLEIL QAEKHQDLTQ WSGIPILVCD VWEHAYYLDY 
QNRRKEYISR WWDLINWHEV ERRLLLAMNG QVPLTVMNNY WLA