Gene Cthe_2980 details

Gene Information

• Locus tag: Cthe_2980
• ID: 4810868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3497915
• End bp: 3498505
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640108402
• Product: hypothetical protein
• Protein accession: YP_001039370
• Protein GI: 125975460

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAGCA AGTACTGGTA TGATTACCTT TGGATTTGGT CAATAGTTTA TTTTTCACTG 
GGTTTTTTTA ATATTTTGTT TGCATGGCTG GGTATGATTG ATTTTTTCGT ACCCATTATT 
ATTGCAATAT TTGCCGGAAA CAAGTGGTTT TGCAATAGAT TGTGCGGTCG GGGACAACTG 
TTTTCCAAAT TGGGAGGAGC GCTTAAATTT TTTGGAAACA GACAGGCTCC CCGATGGCTG 
GTGTCGAAAT GGTTCAGATA TGGTTTTCTT GCATTTTTCC TTGCCATGTT TTTAAACATG 
ATATTCCAGA CTTATTTGGT TGCATCAAAA GCAAGAACAC TAAATGAAGC AATAAAGCTG 
TTCTGGACAT TCGAAGTGCC TTGGAGATGG ACCTATAAAG CAGGGACTGT TCCCGATTGG 
ATTGCGCAGT TTAGTTTTGG CTTTTATGGT TTGATGCTTA CATCCATGCT GATCGGACTT 
GTTGTAATGG TGCTTTACAA GCCCAGAACA TGGTGTGTCT CCTGTCCAAT GGGAACCATG 
ACCCAATCCA TCTGCAAATT AAAACACAGA TCAAATTTGA ATAAAAAATA A 

 

Protein sequence

MKSKYWYDYL WIWSIVYFSL GFFNILFAWL GMIDFFVPII IAIFAGNKWF CNRLCGRGQL 
FSKLGGALKF FGNRQAPRWL VSKWFRYGFL AFFLAMFLNM IFQTYLVASK ARTLNEAIKL 
FWTFEVPWRW TYKAGTVPDW IAQFSFGFYG LMLTSMLIGL VVMVLYKPRT WCVSCPMGTM 
TQSICKLKHR SNLNKK