| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2947 |
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| Symbol | |
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| ID | 4810835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3463959 |
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| End bp | 3465677 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640108370 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001039338 |
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| Protein GI | 125975428 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000162722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTTT CCAATATGTT TTTTCAAACA CTGAGGGAAG TTCCGGCGGA AGCTGAAATA
GCAAGTCATC AGCTTATGCT GAGAGCCGGA CTTATGAGAA AGCTGGCATC GGGAATTTAT
TCCTTCTTAC CTTTGGGTTA CAGGGTTTTT AGAAAGATTG AGCAGATTGT AAGGGAAGAG
ATGGACAGGG CTGGCGCCCA GGAATTGATA ATGTCGGCGC TTCTTCCCGC CGAATCGTAC
CAGGCATCGG GACGATGGGA AGTATTCGGG GCGGAAATGT TCAGGCTCAA AGACAGAAAC
GGAAGGGATT TTTGTCTTGG ACCAACCCAT GAAGAAATAT TTACCGAAAC GGTAAAAAGT
GTTACAAGGT CGTACAGGTC TCTTCCCCTT ATTCTCTACC AGATTCAGAC AAAGTACAGG
GATGAGAGAA GGCCAAGATT TGGTGTTATG AGATCGAGAG AGTTCGTGAT GAAGGACGCA
TACAGTTTTG ACAGGGACGA GGCGGGCCTT GATATATCCT ACAAGAAGAT GTACGATGCA
TACTGCAGGA TATTTGACCG TTTGGGACTG GACTACATCA TTGTGGATGC GGATACCGGA
GCAATGGGAG GTTCAGACTC ACAGGAGTTT ATGGTGAAAT CGGCAGTAGG TGAATCACGC
ATTGCATATT GTGAAGCCTG CGGTTATGCG GCAAATGATG AAAAAGCCGA GTGTGTACCT
GAAAAATGCT GCGATGACAA AGAATGCTGT GGGGAACTTG GACTGGAAAA AGTTGCAACT
CCGGACGTGC GGACCATTGA GGAGCTTATG CAGTTCTTCG GCTGCTCTGC AAAGGAATTT
GCAAAGACCC TTATATATAA AGCGGATGAT AAAGTCGTTG CGGCCATGGT AAGAGGAGAC
AGAGAGCTGA ATGAGACAAA GCTTCAGAAT CTCCTGGGCT GCATAGAGCT TGAAATGGCG
GATGCTGAAA CGGTGGAGAA GGTGACAGGT GCGGCTGTAG GCTTTGCAGG TCCCATAGGC
CTTGATATTG ATATTGTGGT TGACCTTGAA GTTGCAGAAA TGAAGAACTT TGTGGTGGGA
GCAAATGAGA CGGGTTTCCA CTACAAGAAT GTCAATATAA ACAGGGATTT TAAACCCAAA
TACGTGAAAG ACATAAGGAC TATCAAAGAA GGGGATGCAT GCCCCAAATG CGGAGCTCCT
GTAAAGGTTG AATTCGGAAT TGAAGTTGGG CACATATTCA AGCTTGGAAC CAAGTATTCG
GAAGCTTTAG ACTGCATATA TCTTGATGAA ACCGGCAAAG AAAGACCTAT GATTATGGGA
TGCTACGGTA TAGGAATAAA CAGGAGCATG GCCGCCGTAA TTGAACAGAA CAACGACGAA
AACGGAATAA TCTGGCCTAT ATCCATTGCA CCATATCATG TAATTGTAAT ACCGGTAAAT
ACCACCGACA GTGTTCAGAT GGAGCTGGCC GAAAAGATAT ATACCCAGCT GGGAGAAATG
GGCATTGAGG TACTGCTGGA TGACAGGGAC GAACGGCCGG GAGTCAAGTT CAAGGATGCC
GACCTTATTG GTATTCCGAT AAGGATAACT GTAGGAAAAA GAGCAGGAGA AGGCATTGTT
GAATATAAGC TGAGGCGTGA AAAGGATTTT GCTGCAATTC CTTATGAGGA AGCAATTGCA
AAAGCTAAAA AGGAAGTGGC CGAAGGCCTT AAAAAATAA
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| Protein sequence | MRVSNMFFQT LREVPAEAEI ASHQLMLRAG LMRKLASGIY SFLPLGYRVF RKIEQIVREE
MDRAGAQELI MSALLPAESY QASGRWEVFG AEMFRLKDRN GRDFCLGPTH EEIFTETVKS
VTRSYRSLPL ILYQIQTKYR DERRPRFGVM RSREFVMKDA YSFDRDEAGL DISYKKMYDA
YCRIFDRLGL DYIIVDADTG AMGGSDSQEF MVKSAVGESR IAYCEACGYA ANDEKAECVP
EKCCDDKECC GELGLEKVAT PDVRTIEELM QFFGCSAKEF AKTLIYKADD KVVAAMVRGD
RELNETKLQN LLGCIELEMA DAETVEKVTG AAVGFAGPIG LDIDIVVDLE VAEMKNFVVG
ANETGFHYKN VNINRDFKPK YVKDIRTIKE GDACPKCGAP VKVEFGIEVG HIFKLGTKYS
EALDCIYLDE TGKERPMIMG CYGIGINRSM AAVIEQNNDE NGIIWPISIA PYHVIVIPVN
TTDSVQMELA EKIYTQLGEM GIEVLLDDRD ERPGVKFKDA DLIGIPIRIT VGKRAGEGIV
EYKLRREKDF AAIPYEEAIA KAKKEVAEGL KK
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