Gene Cthe_2941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2941 
Symbol 
ID4810224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3456214 
End bp3456927 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID640108364 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_001039332 
Protein GI125975422 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.517337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GTAAAAAGGT TTGGACAAGT GCGGTGGTTG TGGCGGCCGG AAAAGGGACG 
CGTATGAATA TGGATATAAA CAAGCAGTAT ATAGATATAG ACGGGATACC ATTGCTTGCA
AGGACTCTCA AAGTGTTTGA AGACTGCTCT TTGATTGACG AAGTGGTTTT GGTGGTTAAC
AACAATGACA TGTTTTATTG TAAAGAAAAT GTTGTAGAGG CATATGACCT AAAGAAGGTA
AAGTTTTTGG TGGCAGGAGG GGCGCAAAGG CAGGATTCCG TGTACAACGG CCTCTGCCAG
GTAAATAATG AGGCTGAAAT TGTTGTTATC CATGACGGTG CAAGGCCCTT TATAACAGAG
GAAATCATAG AAGAGTGCAT TGAAGCGGCA CAGGAATATG GAGCATCCAC GGCGGCGGTG
CCTGTCAAGG ACACCATAAA GTCGGCGGAT GAAGACGGGT TTGTAAAGAA AACGCTGGAA
AGAAGCACTC TTTGGGCCGT TCAGACACCC CAAGCGTTTT TAAAGGATAT CATAATGAAA
GCTCATAAAA AAGCTGCCGA GGACGGGTTT TACGGCACAG ACGACACCGT TTTGGTGGAA
AGAATGGGAA TGCCTGTCCG GGTGGTTATG GGAAGCTACA ACAACATAAA AATTACCACG
AGGGAAGATT TGATATTTGC CGAAGTGTTG GCAACAAGAC GGGATAAACA ATAA
 
Protein sequence
MKKSKKVWTS AVVVAAGKGT RMNMDINKQY IDIDGIPLLA RTLKVFEDCS LIDEVVLVVN 
NNDMFYCKEN VVEAYDLKKV KFLVAGGAQR QDSVYNGLCQ VNNEAEIVVI HDGARPFITE
EIIEECIEAA QEYGASTAAV PVKDTIKSAD EDGFVKKTLE RSTLWAVQTP QAFLKDIIMK
AHKKAAEDGF YGTDDTVLVE RMGMPVRVVM GSYNNIKITT REDLIFAEVL ATRRDKQ