| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2939 |
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| Symbol | truA |
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| ID | 4810222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3454388 |
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| End bp | 3455122 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640108362 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001039330 |
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| Protein GI | 125975420 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGAACG TGAAGCTTAT TATTGAATAT GACGGTACCA ATTATCATGG CTGGCAAAAG
CAGAAGAATG CAAAAACGGT GCAGGATACA ATTGAAAGGG CGATAAAGGG ACTCACCGGG
GAGAAGGTTG ATCTTATAGG TGCGAGCAGA ACTGACTTTG GAGTGCACGC ATTGGGGCAG
GTGGCAAATT TCATAACCAA CTCCGGCATA CCGGGTGACA GGTTCTCTTA TGCCTTAAAC
AGAATGCTTC CTGATGACAT AGTAATAAAA GAATCACAGG AAGTGGACAT GGATTTTCAT
GCAAGATACA AAGCAAAGGG AAAAAGATAC AGGTATTTGA TTTACAACTC ACAGTTTCCG
TCTGCGCTTT TAAGACACAG GACCTATCAT GTGTCTCACA AACTGGATTT TGAAAGTATG
CAAAGGGCAG CATCGTATTT TTTGGGGACC CATGATTTTT CCGCCTTCAG ATCAAGCGGC
AGCAGTGCAA AAACGTCTGT GAGGACAATT ACGGATGTTT CGCTTGAAAG GGAGGACAAA
ATAGTAAAGT TTGAGATAGC CGGGGACGGA TTTTTGTACA ACATGGTGAG AATAATAGTC
GGAACTTTGA TGGAAGTAGG CATTGGAAAG ATAAGAGCCG ATGAGATACC ACAGATAATC
GAAAGCCGTA AAAGAAAAAG AGCGGGAAGG ACGGCCCCGG CGGAAGGGTT GTATCTGGTG
GAGGTTTATT ATTGA
|
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| Protein sequence | MRNVKLIIEY DGTNYHGWQK QKNAKTVQDT IERAIKGLTG EKVDLIGASR TDFGVHALGQ
VANFITNSGI PGDRFSYALN RMLPDDIVIK ESQEVDMDFH ARYKAKGKRY RYLIYNSQFP
SALLRHRTYH VSHKLDFESM QRAASYFLGT HDFSAFRSSG SSAKTSVRTI TDVSLEREDK
IVKFEIAGDG FLYNMVRIIV GTLMEVGIGK IRADEIPQII ESRKRKRAGR TAPAEGLYLV
EVYY
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