| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2938 |
|---|
| Symbol | |
|---|
| ID | 4810221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3453351 |
|---|
| End bp | 3454304 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640108361 |
|---|
| Product | glucokinase |
|---|
| Protein accession | YP_001039329 |
|---|
| Protein GI | 125975419 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTACA TAGGGATTGA TCTTGGCGGT ACGAATATCG CCGTGGGTTT GGTAAATGAG
GAAGGAAAAA TACTTCACAA GGACAGCGTT CCCACGCTGA GGGAAAGACC GTATCAGGAA
ATAATCAAAG ACATGGCAAT GCTTACCTTA AAAGTAATAA AGGATGCAGA TGTCAGCATT
GACCAGGTTA AAAGCATTGG GGTCGGAAGT CCCGGAACCC CGAACTGCAA GGATGGAATT
CTTATCTATA ACAATAACTT GAATTTCAGA AATGTTCCGA TAAGGTCTGA AATACAAAAA
TATATTGATT TGCCCGTATA CCTTGACAAT GACGCAAACT GTGCGGCACT TGCCGAAAGT
GTGGCAGGGG CGGCAAAAGG CGCAAACACA TCCGTAACCA TAACCTTGGG TACGGGAATA
GGCGGAGGAG TCGTAATAGA CGGCAAAATA TACAGCGGTT TCAACTATGC GGGAGGAGAA
CTGGGGCATA CTGTTTTGAT GATGGACGGT GAGCCTTGCA CCTGCGGAAG AAAAGGCTGC
TGGGAAGCAT ATGCGTCGGC AACGGCTCTT ATAAGGCAGG CCAGAAAGGC GGCCGAGGCA
AATCCCGATT CACTTATAAA CAAGCTTGTG GGAGGGGATT TGTCAAAAAT TGATGCAAAA
ATTCCTTTTG ATGCGGCAAA GCAGGGAGAC AAAACCGGCG AGATGGTGGT GCAGCAATAT
ATAAGATATA TTGCCGAAGG CCTTATCAAC ATGATAAATA TATTTATGCC TGAGGTACTG
GTGATAGGTG GAGGAGTATG CAAAGAAGGA GAATACCTTT TAAAGCCTCT GAGGGAACTT
ATAAAACAGG GAGTTTACAG TAAAGAGGAT ATACCTCAAA CTGAGCTGAG AACGGCCCAA
ATGGGCAATG ACGCCGGAAT AATCGGTGCC GCAATGCTGG GGAAAGAATG TTAG
|
|---|
| Protein sequence | MYYIGIDLGG TNIAVGLVNE EGKILHKDSV PTLRERPYQE IIKDMAMLTL KVIKDADVSI
DQVKSIGVGS PGTPNCKDGI LIYNNNLNFR NVPIRSEIQK YIDLPVYLDN DANCAALAES
VAGAAKGANT SVTITLGTGI GGGVVIDGKI YSGFNYAGGE LGHTVLMMDG EPCTCGRKGC
WEAYASATAL IRQARKAAEA NPDSLINKLV GGDLSKIDAK IPFDAAKQGD KTGEMVVQQY
IRYIAEGLIN MINIFMPEVL VIGGGVCKEG EYLLKPLREL IKQGVYSKED IPQTELRTAQ
MGNDAGIIGA AMLGKEC
|
|---|
| |