Gene Cthe_2922 details

Gene Information

• Locus tag: Cthe_2922
• Symbol: rplO
• ID: 4810205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3442168
• End bp: 3442608
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640108345
• Product: 50S ribosomal protein L15
• Protein accession: YP_001039313
• Protein GI: 125975403
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000292378
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTGT TTGAATTACA ACCTGCTCCA GGCTCGAAGA AGCTACCGAA AAGAAAAGGA 
AGAGGGCACG GGACCGGTAA CGGAAAAACT GCCGGAAGAG GACACAAAGG TCAAAATGCC 
CGTTCCGGAG GCGGGGTAAG ACCCGGATTT GAAGGTGGAC AAATGCCTCT CTACAGAAGA 
GTTCCAAAGA GAGGTTTCAC TAATATATTC TCCAAAGTGT ATACAGAAGT TAATGTATCG 
GCTTTAAATG CGTTTGATGA TGGTACGGTT GTAACACAGG AGCTTTTGAA GGAAAAGGGC 
ATTATCAAGA AGATTAACGA CGGTGTTGTA ATTCTTGGTA ATGGGGAGCT CAAAAAGAAG 
CTTACTGTAA AAGCTGCAAG ATTTAGTAAG ACTGCTGCAG AGAAGATTGA GGCTGCAGGA 
GGAAAGGTCG AGGTGATATA A 

 

Protein sequence

MKLFELQPAP GSKKLPKRKG RGHGTGNGKT AGRGHKGQNA RSGGGVRPGF EGGQMPLYRR 
VPKRGFTNIF SKVYTEVNVS ALNAFDDGTV VTQELLKEKG IIKKINDGVV ILGNGELKKK 
LTVKAARFSK TAAEKIEAAG GKVEVI