Gene Cthe_2918 details

Gene Information

• Locus tag: Cthe_2918
• ID: 4810201
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3440506
• End bp: 3441057
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640108341
• Product: 50S ribosomal protein L6P
• Protein accession: YP_001039309
• Protein GI: 125975399
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000181969
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TAGGTAGGAT ACCGGTAGCA ATTCCAAAGG GTGTTGATGT TAAGCTGGGT 
GACAACAATA CTCTTACCGT TAAAGGACAA AAAGGAACTT TGACGAAACA GTTCCACAAA 
GATATGATTA TCAAGGTTGA AGGAGATAAA ATTATTGTTC AGAGGCCTTC TGATGAAAAG 
AAACACAAAG CATTGCACGG TTTAACGAGG ACTCTCATAA ACAATATGGT TATAGGAGTT 
ACTCAAGGAT ACGAGAAAGC CTTGGAGATA AACGGTGTGG GTTACAGAGC ACAGAAGCAG 
GGTAAAAAGC TGATTCTGAC TCTGGGATAT TCCCATCCTG TTGAGATGGA GGAACCTCAG 
GGTATAACTG TTGAAGTGCC CGCTCCGAAC AAAATAGTTG TAAAAGGGGC CGACAAACAG 
GCTGTGGGTG AATTTGCGGC AAAGATAAGA AGCAAGAGAG AACCTGAGGT TTACAAAGGC 
AAAGGAATTA AGTATGAGGA TGAAGTAATC AGACGCAAAG AAGGTAAAGC AGGCGGCAAA 
GGTAAGAAAT AG 

 

Protein sequence

MSRIGRIPVA IPKGVDVKLG DNNTLTVKGQ KGTLTKQFHK DMIIKVEGDK IIVQRPSDEK 
KHKALHGLTR TLINNMVIGV TQGYEKALEI NGVGYRAQKQ GKKLILTLGY SHPVEMEEPQ 
GITVEVPAPN KIVVKGADKQ AVGEFAAKIR SKREPEVYKG KGIKYEDEVI RRKEGKAGGK 
GKK