Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2905 |
Symbol | rplW |
ID | 4809116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3434797 |
End bp | 3435150 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640108328 |
Product | 50S ribosomal protein L23 |
Protein accession | YP_001039296 |
Protein GI | 125975386 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0089] Ribosomal protein L23 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000254231 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCTG CTGAGGATAT AATTAAAAGG CCGTATATTA CTGAAAAGAG CAATGCCGAG ATTGCAAACG GCAAGTACAC CTTTATTGTG GACGCAAAGG CTACAAAAAC TGAAATAAGA CAAGCAGTTG AAAAGCTGTT TCAGGTAAAG GTTCTCAAAG TGAATACGGT AAACTATAAG GGAAAAAGAA AGAGACTTGG AGTACATGAA GGCTTCAGAC CGGATTGGAA AAAGGCAATT GTCAAGATTG ATACGGAGCC AAAACCGGTA ACATATTTGA CTGAAGGCGG TAAAACAGCC ACTACAACCA AGAAGTATAA AACAAGTATT GAAGAATTTG GTGCTGCACA ATAA
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Protein sequence | MRPAEDIIKR PYITEKSNAE IANGKYTFIV DAKATKTEIR QAVEKLFQVK VLKVNTVNYK GKRKRLGVHE GFRPDWKKAI VKIDTEPKPV TYLTEGGKTA TTTKKYKTSI EEFGAAQ
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