| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2890 |
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| Symbol | |
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| ID | 4809097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3415714 |
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| End bp | 3416883 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640108309 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001039281 |
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| Protein GI | 125975371 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGCC ATAAGCTGAG GCGGCTGCTT AAAAAGGAAG AGGGTCCAAA GCTTGACTTT
AAGGCAGAAT ATGATTTATC CACTGAAAGC GGGAAAAAAG AGCTCACCAA AGACGTTATT
GCCATAGCCA ATTCCAGGGG CGGGCGAGGT TACATTATCC TGGGCATTGA AGACAAAACC
AAAAGAGTGC TGGGAATTGA GCCTAAAAGA TATACTGAGG AGCAGATTCA GCAGATAATT
TACAACCGCT GTGACCCACC TGTGCCGATA TCAGTGGACT TTGTCGGGCT GGATGGAAAA
ACGGTCGGGG TTATCACTGT CTACAGAAGC AGTCATAAGC CCCATCAGAT GATACAAAAC
GGTGCGTTTT ACATAAGAAG AGGTTCAACC ACCGACATAG CAAGGCGCAG TGAAATTGCA
AATCTTTTTC AGGAAAACGG TCTTATGACC TATGAGACGG TGATATTAAA AAATGTCGGT
ATGGAGGAAC TGGACTTCGG GCTTATTAAG GATTACTTCA AAACTCTGAA TGTTTTTAGC
GACAATCCCA GTGAGTTGAT TCTTGAGGCT TTGGGCATAA TCGGACAAAA GTCCGATACG
GAGGAATACC ATCCAACCAT AGGGGGGCTT TTGCTGTTTG GGAAAAATCC TTCTTTGTAC
CTTCCCCATG TTTATGTAAA AGTCGTTTAC AATGGAGAGG CCCGGCTGTT TTTCGGGAAT
ATTTTAAAGA TGCTCGATGA TGTATCCGAC TATATGAGAA GCATAATAAA GGTGGAAGGA
TATCCTTTTA ATGCTTTGGA AGAGGTAATT GCCAATGCTC TTGTTCACAG GGACTATTTG
GATGTTTCAA AAGGAATTGT AATAACGGTT ACGGATAAAA ATATTGAAAT TAGCAATCCC
GGAGCTCTTA TTGCCGGCAA CAGTGTCTAC AGTTTTTCAA GAGAGATCAA TCCCGACAGG
CGAAATCCAT GGCTGTATCA AAGACTTCTG ACCTTGGATC CCAAAAAAAG GTTTATGAAA
TCGGGAGTTG GATTAAAAAG GGTGAAAAAA TCTTTTACCG GCATTGGACC TGTGAAATTT
ATAAATATTG GTTCCCAGAA TTTGTTTAAG GTGCTCCTGC CTATTGGAAA AAAACAAGAG
TCAACCTCTG ATACAAGCGG TTTATTTTAA
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| Protein sequence | MDCHKLRRLL KKEEGPKLDF KAEYDLSTES GKKELTKDVI AIANSRGGRG YIILGIEDKT
KRVLGIEPKR YTEEQIQQII YNRCDPPVPI SVDFVGLDGK TVGVITVYRS SHKPHQMIQN
GAFYIRRGST TDIARRSEIA NLFQENGLMT YETVILKNVG MEELDFGLIK DYFKTLNVFS
DNPSELILEA LGIIGQKSDT EEYHPTIGGL LLFGKNPSLY LPHVYVKVVY NGEARLFFGN
ILKMLDDVSD YMRSIIKVEG YPFNALEEVI ANALVHRDYL DVSKGIVITV TDKNIEISNP
GALIAGNSVY SFSREINPDR RNPWLYQRLL TLDPKKRFMK SGVGLKRVKK SFTGIGPVKF
INIGSQNLFK VLLPIGKKQE STSDTSGLF
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