Gene Cthe_2863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2863 
Symbol 
ID4809143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3381065 
End bp3382069 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content39% 
IMG OID640108282 
Producthypothetical protein 
Protein accessionYP_001039254 
Protein GI125975344 
COG category 
COG ID 
TIGRFAM ID[TIGR01445] intein N-terminal splicing region 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAG CACTTTCTTT TAGTATGGAT GGATTTGACA TGCTGGCAAT GGGAATATCG 
TTGTTTGAAC CATCCAATGC ATTGGTTGAA TTTAACCGGA AGCTGCATTC CAATGCACTT
TATAACGGAT TCCAGATTGC TGTAAACGCG CTGGCTGTTT TCAGTGCCGG GGCGGCATCG
ACAATGAAGT GCTTTGTTGC AGGTACAATG ATATTGACTG CGACAGGCTT GGTTGCGATA
GAGAATATCA AGGCAGGGGA CAAGGTAATT GCGACGAATC CTGAAACTTT TGAAGTAGCC
GAGAAGACAG TGCTTGAGAC ATATGTGAGA GATACGACGG AGCTTTTGCA TTTGACAATC
AATGGAGAGG TAATCAAGAC AACCTTTGAG CATCCGTTTT ATGTAAAAGA TGTGGGTTTT
GTTGAAGCGG GAAAACTGCA GATAGGAGAC AGGTTGGTTG ATTCAAGAGG TAATGTTTTA
GTATTGGAAG GTAAAAAGCT TGAAATAACA GATAAGCCTG TAAAGGTTTA CAATTTTAAG
GTTGATAATT TTCATACGTA TCATGTTGGC GAAAATAGGG TATTGGTTCA TAATGCGAAT
AAGTATGTTA AGGGAACGCG TAGTACTGTA GGTAAACTTA CAGGTTCATT GGATGGGTTA
ACATCAGCAG AAAGAAAGGT TGTAAATGAT TTGCTTTCAC AGGGTAAGAA TGTTGAAATA
ATTCCGCGTT CCAATGTTCA AGGGGTTAGC ACACCTGATT TTATAATAAA TGGGGTAAAA
ACAGAATTAA AAACATTAAA TGGAACAAGT CTAAATACTC CGGTTACTAG GATTACAGAT
GCGTTTAAAC AAGGTGCAGA TGCAGTTATT ATTGATGCAA GAAATGTTGG AATAACTGCT
GAACAGGCAA ACCAAATACT CAATCGAGCT GCAGGCACTT ATCAAAATAA AGTATTACCA
GGTCAAGTTG AGATTTGGAC TGTTGACGGT ATTATTAGGA GGTAA
 
Protein sequence
MTTALSFSMD GFDMLAMGIS LFEPSNALVE FNRKLHSNAL YNGFQIAVNA LAVFSAGAAS 
TMKCFVAGTM ILTATGLVAI ENIKAGDKVI ATNPETFEVA EKTVLETYVR DTTELLHLTI
NGEVIKTTFE HPFYVKDVGF VEAGKLQIGD RLVDSRGNVL VLEGKKLEIT DKPVKVYNFK
VDNFHTYHVG ENRVLVHNAN KYVKGTRSTV GKLTGSLDGL TSAERKVVND LLSQGKNVEI
IPRSNVQGVS TPDFIINGVK TELKTLNGTS LNTPVTRITD AFKQGADAVI IDARNVGITA
EQANQILNRA AGTYQNKVLP GQVEIWTVDG IIRR