| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2854 |
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| Symbol | |
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| ID | 4809134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3371390 |
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| End bp | 3373237 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640108274 |
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| Product | hypothetical protein |
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| Protein accession | YP_001039246 |
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| Protein GI | 125975336 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000844037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTA TAACGTTATA TGCCGGAAAA ATCAACCAAA TGCCCGGATT GATAAATGAA
GTCAAGAAAT CTGTGGTGGA TTACAAGTCA GAATTATCCG CATTGAGAAA GAAAACTTTG
AACATCAACA GAAGTGTATG TAATTTGGAT GAAGTAATAA GTTCCATACA GGCATCTTCC
CAGACTCAGG ATAGAAAAAT TGATTCACTT GAGAAATTCT GCAGTGAAAG CGAGAAGTTT
ATATCGGAAG TAGTACGTAT CGATGAAGAA GTGGCTGAGC TTATCAATAA ACGGAAAGAA
AATTTTTACA AAGAATATTA TTATTTAAAA CCGGAAAGCG AGAAAAGCGG CTGGGAAAAA
ATCAAGGACG GCTTAAAGTC GGTTGCGGAG TGGTGTAAAG AGAATTGGAA ATCCATTGCC
AAGATAGTGG CTGCCGCAGT AGTTATTACC GGGTTGGGGA TAGCGGCGGC ATTGACAGGC
GGTATATTGG GAGTCATACT GGCAGGAGCA TTCTGGGGAG CATTGGCCGG AGGATTGATA
GGGGGAGCGG TTGGAGGAAT AGCCGCTGCG ATAAATGGAG GATCGTTTCT GGAAGGATTT
GCGGACGGCG CTTTAAGCGG AGCAATTTCC GGAGCGGTGA CAGGAGCGGC ATGTGCCGGG
CTTGGTGCTT TAGGAGCTCT AGCAGGGAAA AGCATCCAAT GTATGAGCAC AGTGGGAAAA
GCGATAAATG TTACATCAAA GGTTACGGCA ACACTTTCTT TTGGTATGGA TGGATTTGAC
ATGCTGGCAA TGGGAATATC ATTGTTTGAT CCATCCAATG CATTGGTTGA ATTTAACCGG
AAGCTGCATT CCAATGCACT TTATAACGGA TTCCAGATTG CTGTAAACGC GCTGGCTGTT
TTCACTGCCG GGGCGGCATC GACAATGAAG TGCTTTGTTG CAGGTACAAT GATATTGACT
GTGGCAGGCT TGGTTGCGAT AGAGAATATC AAGGCAGGGG ACAAGGTAAT TGCGACGAAT
CCTGAAACTT TTGAAGTAGC GGAAAAGACG GTGCTTGAGA CATATGTGAG AGAGACAACG
GAGCTTTTGC ATTTGACAAT CAATGGAGAG GTAATCAAGA CAACCTTTGA GCATCCGTTT
TATGTAAAAG ATGTGGGTTT TGTTGAAGCG GGAAAACTGC AAGTAGGAGA TAAGTTGGTT
GATTCAAAAG GCAATCTTTT GGTGGTGGAA GAGAAAAAGC TTGAGATAAC AGATGAACCT
GTTAAGGTTT ATAACTTCAA AGTGGATGAT TTTCATACTT ATCATGTTGG GAAAAAAGGG
ATATTGGTAC ATAATGCAGA CTATAACCCC AAAATGGGAT TTGATGATTT GGACCTTGAG
AAAGCTACGA ACAAACAAAA AGGCAATTAT GGAGAGTATC TGGCAGATGA TAATCTTATT
AATAATCCAA AATTGAAAGA AGCAGGGTAT GATTTGGAGC GGATAGGAGG TAAGGTTCCG
ACCTCACCGG ATGATAAAAT TACAAAAGGG ATAGACGGTA TATATATAAA CAAGAATCCT
AATTCAAATA TTAAATATGT GATTGATGAA GCCAAATTTG GAAAAGCAGG ACTGAGTGCA
AAGACAAGAG ATGGAAAACA AATGTCAGAT TCTTGGTTAG TGGGTTCTCG CTCAAGAAAT
AATAGAATTT TAAAAGCAGT AAGTAATAAT GAAGATTTAG CATTTGACAT AGTGAAAGCA
TTAAGAAATA ACCAAGTAGA AAGAGTATTA TCAAAGATAG ATGTAAATGG AAAAATAATA
ACATATAGAC TGGATAGCAA TGGTAATATA ATTGGACTTT GGCCTTAG
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| Protein sequence | MATITLYAGK INQMPGLINE VKKSVVDYKS ELSALRKKTL NINRSVCNLD EVISSIQASS
QTQDRKIDSL EKFCSESEKF ISEVVRIDEE VAELINKRKE NFYKEYYYLK PESEKSGWEK
IKDGLKSVAE WCKENWKSIA KIVAAAVVIT GLGIAAALTG GILGVILAGA FWGALAGGLI
GGAVGGIAAA INGGSFLEGF ADGALSGAIS GAVTGAACAG LGALGALAGK SIQCMSTVGK
AINVTSKVTA TLSFGMDGFD MLAMGISLFD PSNALVEFNR KLHSNALYNG FQIAVNALAV
FTAGAASTMK CFVAGTMILT VAGLVAIENI KAGDKVIATN PETFEVAEKT VLETYVRETT
ELLHLTINGE VIKTTFEHPF YVKDVGFVEA GKLQVGDKLV DSKGNLLVVE EKKLEITDEP
VKVYNFKVDD FHTYHVGKKG ILVHNADYNP KMGFDDLDLE KATNKQKGNY GEYLADDNLI
NNPKLKEAGY DLERIGGKVP TSPDDKITKG IDGIYINKNP NSNIKYVIDE AKFGKAGLSA
KTRDGKQMSD SWLVGSRSRN NRILKAVSNN EDLAFDIVKA LRNNQVERVL SKIDVNGKII
TYRLDSNGNI IGLWP
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