| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2848 |
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| Symbol | |
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| ID | 4809128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3365247 |
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| End bp | 3366560 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640108268 |
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| Product | phage major capsid protein, HK97 |
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| Protein accession | YP_001039240 |
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| Protein GI | 125975330 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTA TAGCAGATTT AGTACATGAG AAAAAGCAAT TGGTGGAGAA AGCAGAAGCT
ATTTTAAACG AAGCGGAAAA AGCAGGTGGA AGTTTGACTA AGGAACAGGA GCAACAGTTT
AACCGCTACA AAGACAGAAT AACACGCATC AATGATAGCA TTGATGAAGA ATTATCAAAA
ATCAGAACCT CTGAGCCAAT ATTGAATATG CCGCACAATC CCATGGCTCG TGAAGATGTG
TCAAAAATTC CGGTAACAAA GGCTATATCA AAATCATTCA GAGGGATGTT CTATGGAAAC
GAAACTGTGA GCTTAAGCAA CAATGGTTTT CATTCCATGG ATGAATTCCT GAGAACACTT
CACTCAGGCA GAGCCGACAA CAGGCTAATA AATGCCAGTA TGGTGGAAGG AATACCCGAA
TTCGGCGGAT ATTCCGTACC GGAGGAATAC GGAGCCTTCC TGATGGATAA ATCCCTGGAG
AATGAGATCA TTCGTCCCAG AGCAACAGTA TGGGCAATGG GAAGTGAAAC AAAGAAAGTA
TCAGCCTTTG ATGGAGCAGA CAGAACCAAT CACCTATTCG GCGGTATCTC AGGAGAATGG
CTGGAGGAAG GACAGACAGG CACACGAAAA ACAGCCAAGT TAAGGCTGAT TCAACTGAAA
GCCAAGAAGC TGGCCTGCTT CTCACAGGCA TCCAATGAAC TTATTGCAGA TGGTATGTCC
TTTGAGGAAA TGTTAGCTGG AGCGCTTATT AAAGGCTTGG GCTGGTACAT GGACTATGCC
TTTATCAATG GAACCGGTGA AGGCCAGCCT CTTGGTATTA TAAATGACCC GGCACTGATT
ACTGTAAATA AAGAGGCTTC TCAAGAACCA GCCACAATTA CCTATCAAAA CGTGGTCAAT
ATGTTCTCAA GGCTTGCTCC GTCATGTTTT ACCAATGCGG TATGGCTTGC CAATCCATCG
GTAATACCAC AATTGCTCAC CATGACCATT ACCATTGGTA CCGGTGGCGC TCAGATACCG
GTATTCAGGG AAGAGAGCGG GAAATTCACA CTTCTGGGTA AGGAGGTCTT ATTCACTGAG
AAATGCCCCA CATTGGGTGC TAAGGGAGAT TTAATCCTTG CAGATCTTTC CCAGTATGCC
ATAGGCATGA GGAAAGAGAT CGCTCTTGAC CGCTCCAATG TCCCAGGCTG GATGGAGGAT
ATGACCGACT ACAGGGTGAT AGTGCGTGTA GATGGTCAGG GAACCTGGGA TAAACCTATA
ACACCGAAAA ACGGAGCAAC GCTCTCATGG GCAGTGGCTT TGGAAGCGAG ATGA
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| Protein sequence | MRFIADLVHE KKQLVEKAEA ILNEAEKAGG SLTKEQEQQF NRYKDRITRI NDSIDEELSK
IRTSEPILNM PHNPMAREDV SKIPVTKAIS KSFRGMFYGN ETVSLSNNGF HSMDEFLRTL
HSGRADNRLI NASMVEGIPE FGGYSVPEEY GAFLMDKSLE NEIIRPRATV WAMGSETKKV
SAFDGADRTN HLFGGISGEW LEEGQTGTRK TAKLRLIQLK AKKLACFSQA SNELIADGMS
FEEMLAGALI KGLGWYMDYA FINGTGEGQP LGIINDPALI TVNKEASQEP ATITYQNVVN
MFSRLAPSCF TNAVWLANPS VIPQLLTMTI TIGTGGAQIP VFREESGKFT LLGKEVLFTE
KCPTLGAKGD LILADLSQYA IGMRKEIALD RSNVPGWMED MTDYRVIVRV DGQGTWDKPI
TPKNGATLSW AVALEAR
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