| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2824 |
|---|
| Symbol | |
|---|
| ID | 4809661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3339763 |
|---|
| End bp | 3340554 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640108244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001039216 |
|---|
| Protein GI | 125975306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000228641 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAG CATTAAAATA CGCAGAAGCA AATATCCCAG TCATACCATT GCATTGGATT
TGTGAGGATG GCTCCTGCTC CTGCAAGGAA GGGAGTAATT GTGACAGCAA AGGAAAGCAT
CCGTTATATA CCGGCTGGTA CAAGAATTCC ACTGCTTATG TTGAGCAAAT AAGGAAATGG
TGGACGAAAA CCCCCAATGC CAATATAGGC ATTCCTACAG GCGAGAAGTC TGACTGGCTG
GTACTTGATG TGGATGATGG CGGTGATGAA ACCATATCTG CACTTGAAGC AACACATGGA
AAACTCCCGG ATACGGTTAC TGCTGTTACA GGAAGTGGAG GTTGGCACTA TGTCTTTAAA
TACCCTAAAG GCCGGAGTAT CCCAAATAAG ACCAAGTTTG CATCGGGTCT TGATACGCGT
TCAACAGGTG GACTGATTGT CGTGGCTCCA AGCATTCATG TAAGCGGTAA TCAGTACCAA
TGGTTAGAAG GACATTCTCC CTTTGACAGA ACCCTGGCAG AAGCTCCGGA GTGGCTATTA
AAGCTTATGG AAAGGGAGGA AGTATTGCTT ACACCCTTTG AAGGTAGCAG TATTATAGTC
GAGATTAAGG AAGGAAACCG CAACAGTACC CTGACAAGCC TTGCAGGAAC CATGAGAGCA
AGAGGAATGA CGGAGGAAGG CATCTATACG GCATTACTTG CAGAAAACAA CGCAAGGTGC
AATCCTACGC TTGATGAAGC GGAAGTTAAG AAAATATATA GTTTAGATTT TCAAAGAGTT
AGTAACTTGT AA
|
|---|
| Protein sequence | MDAALKYAEA NIPVIPLHWI CEDGSCSCKE GSNCDSKGKH PLYTGWYKNS TAYVEQIRKW
WTKTPNANIG IPTGEKSDWL VLDVDDGGDE TISALEATHG KLPDTVTAVT GSGGWHYVFK
YPKGRSIPNK TKFASGLDTR STGGLIVVAP SIHVSGNQYQ WLEGHSPFDR TLAEAPEWLL
KLMEREEVLL TPFEGSSIIV EIKEGNRNST LTSLAGTMRA RGMTEEGIYT ALLAENNARC
NPTLDEAEVK KIYSLDFQRV SNL
|
|---|
| |