Gene Cthe_2806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2806 
Symbol 
ID4809643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp3307313 
End bp3308017 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content41% 
IMG OID640108226 
Producthypothetical protein 
Protein accessionYP_001039198 
Protein GI125975288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000158886 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ACAAGATTTT AGCTGTTGTG GCAAGCTGTC TGCTTCTAAT CTCTGTTTTT 
GCAAACACAG CAACGCCGGC ATTTGGCGAA GCAACCGGGG CACCGGGAAA GCCTATACTG 
GGAATAGTGG AAGACAATGG TGTAATCAGC TGTAAAATTA TACTTTTAGC CGACAATAAT 
AACGGAACCC GTTGGAGATT ATATGAGAAT GGCAAACTTA TTCAATGCGG TTCGGCGGAA 
GATAATACTC CCGAACCACA AGTAATAATA TTGGAGCCGT TTACAAGACC TGCAGGACAG 
TATAAATACA AATGCGAATT GATAAACAAG TATGGTTCAA CTTTTAGTGA TGAAAGAATA 
TTTACAGTAA ATCACGGATT TATTGACGAG GTTCCTCAGG CAATATTTAC GGAAGATTTC 
GAAAACGGAG CCAACGGTTG GACCGTTGTA AGTTCCGACC CCGGTTCAAC TGTGGTAATT 
GAAAACGGCA CCGGTATTTA CGGTTCAAAA TGTGTAAAAA TATCTTCTTC AGTTTTTTCC 
GATACTGCAT ATACAAAGCA AATCAGCGGC CTTACGATCG GTGAAAAATA CAGGCTGACT 
GCATATGTCA AATATCAAGA CGTGGTAAGA GACCCTAATT CTTTTTACTG GCCGGTCATA 
GGGCCTAACG TTTGCATCTA TCCCACATGG GACTTATTCA GGTGA
 
Protein sequence
MKKNKILAVV ASCLLLISVF ANTATPAFGE ATGAPGKPIL GIVEDNGVIS CKIILLADNN 
NGTRWRLYEN GKLIQCGSAE DNTPEPQVII LEPFTRPAGQ YKYKCELINK YGSTFSDERI 
FTVNHGFIDE VPQAIFTEDF ENGANGWTVV SSDPGSTVVI ENGTGIYGSK CVKISSSVFS 
DTAYTKQISG LTIGEKYRLT AYVKYQDVVR DPNSFYWPVI GPNVCIYPTW DLFR