| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2800 |
|---|
| Symbol | |
|---|
| ID | 4810117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3299819 |
|---|
| End bp | 3301000 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640108220 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_001039192 |
|---|
| Protein GI | 125975282 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000680188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA TATTTGACGA AGTTGTAAAC AGAAGAAATA CCGACAGTCT CAAATGGGAC
TCTTGCAGGC AGAGATTCGG CAAAGCAGAC ATTCTTCCAA TGTGGGTTGC CGATATGGAT
TTTAAATCAC CCTCTATTAT TACAGAGGCC ATAATACGGA GAGCTCAGCA TGGGATATTC
GGTTATACCG AAGCGTCGGA AAGGTTGTCA GCGGCTTTGG CCGGTTGGGT GAAAAAAAGA
CACAACTGGC AGATAGACGA GAGGTGGATT TCTTACAGTC CGGGCGTTGT TACTTCGGTA
AACACCGCAA TACTTGCATA TACGAATCCA GGGGACAAGG TTTTAATGCA GACTCCCATA
TACTACCCTT TTTATTCCAG TATTCTGGAT AATGAGAGGG AGCTGGTGAC AAATTCCCTA
AGGGATAATA ACCGACATTA TGAAATTGAT TTTGAAGACC TTGAAAAGAA GCTTTCCGAC
AATGTGAAAA TGATGATTTT CTGCAGTCCC CACAATCCGA TAGGCAGGGT TTGGAAGATT
GATGAACTCA AAGAGGTATT GAGGCTTTGC AAAAAATACA ATGTAATTCT TGTTTCGGAC
GAAATTCATT CGGATTTGGT GTTTAAGGGA CACAAACATA TTCCGGTTGG GTTGCCGGCT
GCGGAAAGCG ATTTTGAAAA CTTTATTGTG CTGGTGTCGC CGACGAAAAC CTTCAATATT
GCGGGACTTT CGGTGTCTGC CTCAATAATA CCTGATGCGG GGCTAAGGAG AAAATTCAGA
GCAACTTTAA GCAAAAACGG AGCCAACATG CTGAACATAT TCGGGCTTGT GGCGGCCGAG
GCTGCTTATT CAAGCTGTGA AAAATGGCTG GATGAACTGC TTTTGTATCT TGAAGAAAAT
CTAAATACTC TGGAAGAGTA TTTTAAGAAC AATATCCCTC AAATAAAAGT GATAAGGCCG
GAGGCGACGT ATCTGGCATG GCTTGACTGC AACGGGCTTC TGGTTCCGGC GGAAGAGCTG
AAGAGCTTTT TTGTCAACAA AGCGGGCGTG GGATTAAATG ACGGGGTGAC CTTCGGCAAA
GAGGGCCTTG GTTTTCAGAG ACTCAATTTC GCCTGCCCGA GAACGGTTTT ACTGGAAGGA
CTTTCAAGAA TCAAAAAAGC TGTAGATGAG CTTTCCAATT AG
|
|---|
| Protein sequence | MSSIFDEVVN RRNTDSLKWD SCRQRFGKAD ILPMWVADMD FKSPSIITEA IIRRAQHGIF
GYTEASERLS AALAGWVKKR HNWQIDERWI SYSPGVVTSV NTAILAYTNP GDKVLMQTPI
YYPFYSSILD NERELVTNSL RDNNRHYEID FEDLEKKLSD NVKMMIFCSP HNPIGRVWKI
DELKEVLRLC KKYNVILVSD EIHSDLVFKG HKHIPVGLPA AESDFENFIV LVSPTKTFNI
AGLSVSASII PDAGLRRKFR ATLSKNGANM LNIFGLVAAE AAYSSCEKWL DELLLYLEEN
LNTLEEYFKN NIPQIKVIRP EATYLAWLDC NGLLVPAEEL KSFFVNKAGV GLNDGVTFGK
EGLGFQRLNF ACPRTVLLEG LSRIKKAVDE LSN
|
|---|
| |