| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2799 |
|---|
| Symbol | |
|---|
| ID | 4810116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3298648 |
|---|
| End bp | 3299808 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640108219 |
|---|
| Product | cystathionine gamma-synthase |
|---|
| Protein accession | YP_001039191 |
|---|
| Protein GI | 125975281 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000029873 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG TTGGGAATGT GTCAAACTAT AGTATAAGTA CAAAAGTGGT ACATGGTTCA
AAGTGTTATG ACCCGCATAC CGGGGCGGTA AGTTTCCCCA TATATCAAAG TGCTACTTTC
AGACATCCGG CGCTCTATCA GACAACGGGT TATGATTATT CACGCTTGCA GAATCCGACA
AGGGAAGAAC TTGAAAACAC CATTGCAAAT ATCGAAAACG GGAAGTTTGG ATTTGCCTTT
TCCAGCGGCA TGGCGGCAGT ATCCACCATA CTGTCTCTTT TTTCACCCAA AGACCATATC
ATTGTTTCCG ATGACCTTTA TGGTGGTACT TACAGACTGT TTGAGGAAAT ATACAAAAAA
TACGGTTTGG AATTTTCCTA TGTCAACACA AGCAGGATTC AGGACATAGA AGAAGCTGTG
AAAGAGAACA CAAAGGCGTT TTTTATTGAG ACCCCCACAA ACCCGATGAT GAAGGTGGCC
GATTTAAAGA CGATATCGCG GTTTGCAAAA GACAGGAAAA TACTTTTGAT TGTGGACAAT
ACTTTTCTTA CACCGTATTT TCAGAGGCCC TTGGAGCTGG GGGCGGATAT TGTGGTTCAC
AGCGGAACGA AATATCTCGG GGGACATAAC GATACTTTGG CGGGTCTTGT TGTAGTTAAT
GATGAAGAGC TTGCCGAAAG GATAAAACTT ATTCAAAAAT CGGAAGGGGC CGTACTGTCT
CCTTTTGACA GCTGGCTGAT TTTAAGAGGT ATAAAGACGC TGGGGGTACG CCTTGAAAAG
CAGCAGGAAA ATGCCATGAA AATTGCAAAA TGGCTTTGTA CCCATAAAAA TGTCACAAAG
GTCAACTATG TGGGATTGCC CGACCATGAA GGCTATGAAA TTTCGAAATC CCAGGCTTCC
GGTTTTGGAG CCATGATTTC CTTTAACGTA AAAGACGTTC AGACTGTGGA AAAGGTTTTA
AGCAAGGTGC AGCTTGTAAT GTTTGCTGAG AGCCTCGGCG GTGTGGAAAG CTTGATTACC
TATCCTGCCG TTCAGACCCA TGCTGCCATA CCGGAAGAAA TGAGAAATAG AATCGGGGTT
ACCGATACGC TTTTAAGGCT TTCGGTGGGA ATTGAGGATG CAGACGATAT AATTGCCGAC
CTTGAGCAGG CCTTGGAATA G
|
|---|
| Protein sequence | MMKVGNVSNY SISTKVVHGS KCYDPHTGAV SFPIYQSATF RHPALYQTTG YDYSRLQNPT
REELENTIAN IENGKFGFAF SSGMAAVSTI LSLFSPKDHI IVSDDLYGGT YRLFEEIYKK
YGLEFSYVNT SRIQDIEEAV KENTKAFFIE TPTNPMMKVA DLKTISRFAK DRKILLIVDN
TFLTPYFQRP LELGADIVVH SGTKYLGGHN DTLAGLVVVN DEELAERIKL IQKSEGAVLS
PFDSWLILRG IKTLGVRLEK QQENAMKIAK WLCTHKNVTK VNYVGLPDHE GYEISKSQAS
GFGAMISFNV KDVQTVEKVL SKVQLVMFAE SLGGVESLIT YPAVQTHAAI PEEMRNRIGV
TDTLLRLSVG IEDADDIIAD LEQALE
|
|---|
| |