| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2757 |
|---|
| Symbol | |
|---|
| ID | 4810260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3251706 |
|---|
| End bp | 3253322 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640108177 |
|---|
| Product | potassium/proton antiporter |
|---|
| Protein accession | YP_001039149 |
|---|
| Protein GI | 125975239 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTATC TAACCGTTGG TCTTATTCTC ATCCTTGCAT TGTTTGCCAT TCGTTTTTCC
AACAGGTATG GTATACCTGC TCTCCTCTTA TTTATTGTAT TAGGTATGTT TTTTAGTATT
GGTATCGATT TTGGCGATTA TGAATTTGCC GACACTTTTG CTACAGTTGC GCTTATGGTC
ATCATGTTTT ACGGTGGGTT CGGAACCAAC TGGAAAATGG GAAAACCTGT TGCGAAAGAG
GCAATTGTAT TAAGTTCTCT GGGAGTTATT ACAACTGCGT TAATGACAGG CTTGTTTTGT
CATTATGTTT TAGGTTTTAA ATTGTTGGAA GGCATGCTTA TTGGTTCTAT TGTGGGTTCG
ACGGACTATG CCAGCGTCTC GAATATTTTG CGTTCAAAAA ATTTGAATTT AAAATACAAT
ACTGCATCTT TGCTTGAACT TGAAAGCGGC TCAAACGACC CGACGGCTTT TACAATGACG
ATGGTGTTTT TGTCCGCAAT AATAGGCACA AAGCTGTCTG TTCCGGTTTT GATTTTATCC
CAGGTTGTTT TGGGAATTGT TATGGGTTGT ATTTTTTCAT TTGTTATCGG GAAATTGCTG
AAAAATTATT CATTGGAATC AGACGGACTT TATGCTGTCT TTATGGCTTC TATAATACTT
GTTACATATG CCGCAACGGA TCTTTTGGGC GGTAATGGGT ATTTGGCTCT CTATATTTTG
GGTATTTATC TTGGCAATAT GGAGTTTAAA GGCAAACGTA ACATAATGTT TTTCTTTGAC
GGCTTTACTG AAATTATGCA GATAGGTTTG TTTTTCATCT TGGGTCTGTT GTCCGAGTTG
CCCAAATTCA TTGCGGGATT GCCGTGGGCA CTTGCTATTA TGCTGTTTAT GACTGTCATT
GCACGTCCGG TGACTGTTTA TGGATTAATG TTGCCGTTTA GGCTTAAATT CAACCAGCTG
AACATCATTT CACTGGCAGG TATTCGCGGA GCCGCTGCTA TTGCCTTCGC AATCATGGCT
GTAAACAGTC CGGCGGTTTT ATCTGTTGAT GTTTATCATA TTGTGTTTGG TATATGTGTG
CTTTCATCCT TGATTCAAGG CAGTTTAATG CCGTTTGCGG CAAAACGGTT GGATATGCTG
GACCCCGGGG ATACGGTTTT AAAGACTTTC AACTATTATC AGGACAAATC GGAAATTGGC
TTTTTGGAAA CAAGAATCGG TCCGAACAGC AGCTTGATTG GTAAAAAGGT GAAGGATTTA
AATCTCACAT TCGATTTTAT AGTTGCCAAG ATCGAGCGTA ACGGCAAAAC TATTGTTCCC
AGGGGACATG TTACTATAAA AGAAAATGAT TTGATAGTCA TAGGTGGAGC GGTGCATTTT
GATAAAACCG GCCATGAGCT TACGGAGTTT ACTATTTCAA AAGGTCACAA ATGGCCAAAC
AAATACATCA AGGATTTGGA ATTGCCTCAT AACCACCTTA TAATCATGAT ACAGCGCGAA
GGAAATGAAA TTATTGTTCC GGTTGGTGAT ACCTTGCTTC TGGAAGGCGA TAAAATTATT
ATGATTAAAG CGGAACATCC CCTTGAATTT CCTTTGGCTA ATGAGATGGC AACATAG
|
|---|
| Protein sequence | MSYLTVGLIL ILALFAIRFS NRYGIPALLL FIVLGMFFSI GIDFGDYEFA DTFATVALMV
IMFYGGFGTN WKMGKPVAKE AIVLSSLGVI TTALMTGLFC HYVLGFKLLE GMLIGSIVGS
TDYASVSNIL RSKNLNLKYN TASLLELESG SNDPTAFTMT MVFLSAIIGT KLSVPVLILS
QVVLGIVMGC IFSFVIGKLL KNYSLESDGL YAVFMASIIL VTYAATDLLG GNGYLALYIL
GIYLGNMEFK GKRNIMFFFD GFTEIMQIGL FFILGLLSEL PKFIAGLPWA LAIMLFMTVI
ARPVTVYGLM LPFRLKFNQL NIISLAGIRG AAAIAFAIMA VNSPAVLSVD VYHIVFGICV
LSSLIQGSLM PFAAKRLDML DPGDTVLKTF NYYQDKSEIG FLETRIGPNS SLIGKKVKDL
NLTFDFIVAK IERNGKTIVP RGHVTIKEND LIVIGGAVHF DKTGHELTEF TISKGHKWPN
KYIKDLELPH NHLIIMIQRE GNEIIVPVGD TLLLEGDKII MIKAEHPLEF PLANEMAT
|
|---|
| |