Gene Cthe_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2730 
Symbol 
ID4810232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3222531 
End bp3223733 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content42% 
IMG OID640108149 
Productelongation factor Tu 
Protein accessionYP_001039122 
Protein GI125975212 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAG CTAAATTTGA AAGAACAAAA CCCCACGTTA ATATCGGAAC GATTGGTCAC 
GTTGACCATG GTAAGACATC ATTGACTGCG GCTATAACAA AAGTTTTAGG TTTCCAGGGT
AAGGCAAACT ATACTTCTTA TGAAAACATC GACAAAGCTC CGGAAGAAAG AGAAAGAGGT
ATTACAATAT CAACTTCACA CGTTGAGTAT GAAACTGATA ACAGACACTA TGCTCACGTT
GACTGCCCTG GTCATGCCGA CTACGTTAAG AACATGATCA CAGGTGCTGC TCAGATGGAC
GGTGCTATAC TTGTTGTATC AGCAGCAGAC GGTCCGATGC CACAGACAAG AGAACACATT
TTGTTGGCTC GTCAGGTTGG TGTGCCATAC ATAGTTGTTT TCTTGAACAA GTGTGATATG
GTAGATGACG AGGAACTTCT CGAATTGGTT GAAATGGAAA TCAGAGAACT CCTGAATACT
TACGAATTCC CCGGAGACGA AATTCCGATA ATAAGAGGTT CAGCACTTGC TGCTCTTGAA
TCAACAGCTA CTTCAGTTGA CGCTCCGGAA TATCAACCGA TTTTGAAACT CATGGAGGAA
GTTGACAAAT ATATTCCGAC TCCTCAGAGA GATATTGACA AACCGTTTGC TATGCCTGTT
GAAGATGTAT TCACAATTAC AGGTCGTGGT ACTGTTGCTA CAGGTAGAGT TGAAAGAGGA
ACTCTTAAGA TGGGTGACGA AGTTGAAATT GTTGGTTTGT CTGATTCTCC GAAGAAAACA
GTTGTCACCG GTATAGAAAT GTTCAGAAAG CTTCTTGATC AGGCTGTTGC TGGTGACAAT
ATAGGAGCTC TCCTGAGAGG TATTCAGAGA AATGAGGTAG AAAGAGGACA GGTTCTTGCA
AAACCCGGTT CAATCAAACC TCACACTTAT TTTGAAGCAC AGGTTTACGT TTTGACAAAA
GAAGAAGGTG GAAGACATAC TCCTTTCTTC AACAACTACA GACCTCAGTT CTATTTCAGA
ACTACTGACG TTACAGGAGT AGTTGAGCTT CCTCAGGGAA CTGAAATGGT TATGCCCGGT
GACCACATAA CCATGAAAGT CAAATTGATA ACTCCTGTAG CTATGGAAGA AGGATTGAAG
TTCGCTATCC GTGAAGGTGG TAGAACTGTA GGAGCAGGAA ACGTATCCAA GATAATTGAA
TAA
 
Protein sequence
MSKAKFERTK PHVNIGTIGH VDHGKTSLTA AITKVLGFQG KANYTSYENI DKAPEERERG 
ITISTSHVEY ETDNRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPY IVVFLNKCDM VDDEELLELV EMEIRELLNT YEFPGDEIPI IRGSALAALE
STATSVDAPE YQPILKLMEE VDKYIPTPQR DIDKPFAMPV EDVFTITGRG TVATGRVERG
TLKMGDEVEI VGLSDSPKKT VVTGIEMFRK LLDQAVAGDN IGALLRGIQR NEVERGQVLA
KPGSIKPHTY FEAQVYVLTK EEGGRHTPFF NNYRPQFYFR TTDVTGVVEL PQGTEMVMPG
DHITMKVKLI TPVAMEEGLK FAIREGGRTV GAGNVSKIIE