Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2730 |
Symbol | |
ID | 4810232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3222531 |
End bp | 3223733 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640108149 |
Product | elongation factor Tu |
Protein accession | YP_001039122 |
Protein GI | 125975212 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG CTAAATTTGA AAGAACAAAA CCCCACGTTA ATATCGGAAC GATTGGTCAC GTTGACCATG GTAAGACATC ATTGACTGCG GCTATAACAA AAGTTTTAGG TTTCCAGGGT AAGGCAAACT ATACTTCTTA TGAAAACATC GACAAAGCTC CGGAAGAAAG AGAAAGAGGT ATTACAATAT CAACTTCACA CGTTGAGTAT GAAACTGATA ACAGACACTA TGCTCACGTT GACTGCCCTG GTCATGCCGA CTACGTTAAG AACATGATCA CAGGTGCTGC TCAGATGGAC GGTGCTATAC TTGTTGTATC AGCAGCAGAC GGTCCGATGC CACAGACAAG AGAACACATT TTGTTGGCTC GTCAGGTTGG TGTGCCATAC ATAGTTGTTT TCTTGAACAA GTGTGATATG GTAGATGACG AGGAACTTCT CGAATTGGTT GAAATGGAAA TCAGAGAACT CCTGAATACT TACGAATTCC CCGGAGACGA AATTCCGATA ATAAGAGGTT CAGCACTTGC TGCTCTTGAA TCAACAGCTA CTTCAGTTGA CGCTCCGGAA TATCAACCGA TTTTGAAACT CATGGAGGAA GTTGACAAAT ATATTCCGAC TCCTCAGAGA GATATTGACA AACCGTTTGC TATGCCTGTT GAAGATGTAT TCACAATTAC AGGTCGTGGT ACTGTTGCTA CAGGTAGAGT TGAAAGAGGA ACTCTTAAGA TGGGTGACGA AGTTGAAATT GTTGGTTTGT CTGATTCTCC GAAGAAAACA GTTGTCACCG GTATAGAAAT GTTCAGAAAG CTTCTTGATC AGGCTGTTGC TGGTGACAAT ATAGGAGCTC TCCTGAGAGG TATTCAGAGA AATGAGGTAG AAAGAGGACA GGTTCTTGCA AAACCCGGTT CAATCAAACC TCACACTTAT TTTGAAGCAC AGGTTTACGT TTTGACAAAA GAAGAAGGTG GAAGACATAC TCCTTTCTTC AACAACTACA GACCTCAGTT CTATTTCAGA ACTACTGACG TTACAGGAGT AGTTGAGCTT CCTCAGGGAA CTGAAATGGT TATGCCCGGT GACCACATAA CCATGAAAGT CAAATTGATA ACTCCTGTAG CTATGGAAGA AGGATTGAAG TTCGCTATCC GTGAAGGTGG TAGAACTGTA GGAGCAGGAA ACGTATCCAA GATAATTGAA TAA
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Protein sequence | MSKAKFERTK PHVNIGTIGH VDHGKTSLTA AITKVLGFQG KANYTSYENI DKAPEERERG ITISTSHVEY ETDNRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI LLARQVGVPY IVVFLNKCDM VDDEELLELV EMEIRELLNT YEFPGDEIPI IRGSALAALE STATSVDAPE YQPILKLMEE VDKYIPTPQR DIDKPFAMPV EDVFTITGRG TVATGRVERG TLKMGDEVEI VGLSDSPKKT VVTGIEMFRK LLDQAVAGDN IGALLRGIQR NEVERGQVLA KPGSIKPHTY FEAQVYVLTK EEGGRHTPFF NNYRPQFYFR TTDVTGVVEL PQGTEMVMPG DHITMKVKLI TPVAMEEGLK FAIREGGRTV GAGNVSKIIE
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