| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2725 |
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| Symbol | |
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| ID | 4810719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3215205 |
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| End bp | 3218702 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640108144 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001039117 |
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| Protein GI | 125975207 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0213072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGAAC TTAATAACTT CGATTCAATA AGAATAGGTT TAGCTTCTCC GGAAAAGATC
AGAGAATGGT CCAGGGGTGA AGTAAAAAAA CCCGAGACCA TAAACTACAG AACGTTAAAG
CCTGAAAGAG ACGGACTTTT CTGTGAAAGA ATATTCGGAC CCCAAAAGGA CTGGGAGTGC
CATTGCGGAA AGTATAAGAG AATCAGATAT AAAGGCATAG TGTGTGACCG TTGTGGAGTT
GAAGTTACAA GGTCAAAAGT AAGAAGGGAA AGAATGGGGC ATATTGAGCT GGCAGCCCCT
GTGTCCCACA TATGGTACTT TAAAGGAATA CCCAGCAGAA TGGGACTGCT TTTGGACATG
TCTCCAAGAG CTCTGGAAAA AATATTGTAT TTTGCGGCCT ATGTCGTTAT CGACCCGGGA
CAGACCCCTC TTTCCAAAAA ACAAATATTG TCGGAAAAAG AATACAGGGA CAGTCTGGAA
AAGTTTGGGC CGAAGTTCCG TGCCGGAATG GGTGCGGAAG CGGTAAGGGA GCTTCTTCAG
GAAATCAATC TTGACGAGCT TTCCGCTGAG CTTAGGGAAG AAATCAAACA GTCCACGGGA
CAAAAGAGAG TAAGGGCAAT TAAAAGGCTT GAAGTGGTTG AGGCTTTCAG ACAGTCACAA
AACAAGCCTG AATGGATGAT ATTGGATGTA ATTCCGGTTA TTCCGCCGGA ACTCAGACCG
ATGGTTCAGC TTGACGGTGG AAGGTTTGCG ACTTCAGACT TAAACGACTT GTACAGAAGA
GTTATAAACA GAAACAACAG ATTAAAAAGA CTTTTGGACC TTGGAGCACC GGACATAATC
GTACGTAATG AAAAGAGAAT GCTCCAGGAG GCAGTTGATG CATTAATAGA CAACGGAAGA
AGAGGAAGAC CGGTAACCGG TCCCGGAAAC AGACCGTTAA AATCCCTTTC CGACATGTTG
AAAGGTAAAC AGGGTAGATT CCGTCAGAAC CTTTTGGGAA AACGTGTTGA CTATTCCGGT
CGTTCGGTTA TAGTTGTGGG GCCGGAACTT AAGATATACC AGTGCGGACT TCCGAAAGAA
ATGGCTTTGG AGCTTTTCAA ACCCTTTGTA ATGAAAAAGC TTGTTAACGA CGGCCTTGCT
CATAATATAA AGAGTGCAAA AAGAATGGTT GAAAGAGTAA GAAATGAGGT ATGGGATGTA
CTTGAGGAAG TTATCAAGGA GCATCCGGTA CTATTGAACC GTGCACCGAC CTTGCACAGA
TTGGGAATTC AGGCGTTTGA ACCCGTGCTT GTGGAAGGTA GGGCGTTAAA GCTTCATCCG
TTGGTATGTA CGGCATACAA TGCCGACTTT GACGGAGACC AGATGGCCGT TCACGTTCCC
CTTTCCGCTG AAGCACAGGC GGAAGCAAGA TTTTTAATGC TTTCAGCCAA CAACCTGCTG
AAACCACAGG ATGGAAAACC GGTTGCGGTT CCCACCCAGG ATATGGTTTT GGGTAGTTAC
TATCTTACGA TTTTAAAAGA AGGTGCAAAG GGTGAAGGAA GAGTATTCAC CTCAATGGAC
GAAGCCGTAA TGGCCTATGA CAATGGAGAA ATAGAGCTTC ATTCAAAGAT AAAAGTAAGA
ATGAAGAGGG TTGTAGATGG TGTTGAAAAG TCAAAAATAA TAGAAACCAC TTTGGGAAGG
CTTATATTCA ATGAAGCCAT TCCTCAGGAT TTGGGCTTTG TGGACAGAAG TGATCCTGAC
AAAATCTTTG ACCTTGAAGT CGATTTCCTT GTCGGAAAAA ATGAGCTTAA GAAAATAATT
GACAAAAGCA TAAAGGTGCA TGGAACCACT AAGACAGCAA TATTGCTCGA CAAAATAAAG
GAATTGGGCT TTAAGTATTC CACAAAGGGA GCTATAACCA TAAGTATATC AGATATGGTT
ATACCGGAAG TAAAAGCCAA GTATATAAAA GAAACTGAGG AAAAGATTGA GAAAATTACA
AAACAGTACA AGAGAGGACT TATATCCGAC GAAGAAAGAT ATAATTCAGT TATAGCTGCA
TGGACGGAAG CTTCGGAAAA TATCACCCGT GCGCTTATAA ACAATCTCGA CAGGTTCAAT
CCGGTGTATA TGATGTCCCA GTCCGGAGCG AGAGGTAACA TCAATCAGAT AAAACAGCTG
GCCGGTATGA GGGGTCTTAT GGCTGACACA TCCGGTAAGA CCATAGAGTT CCCGATTAAG
GCTAATTTCC GTGAAGGCCT TACCGTTATG GAGTTCTTTA TATCCACTCA CGGTGCAAGA
AAGGGTCTTG CAGACACGGC ACTAAGAACT GCCGACTCGG GTTATTTGAC AAGACGTCTT
GTTGACGTAA GTCAGGATGT TATTGTAAGA GAAACTGACT GCGGAACAAG AAAAGGAATA
GAAGTAACGG ATATAAAAGA CGGAAATGAA GTAATTGAAG AACTGTCAGA AAGAATTATC
GGAAGATATC CTGTCGGAAA CATAGTGCAT CCTGAAACAG GAGAAATAAT TGTTGAAGCA
GGAAGAATGA TAACTGACCA GGATGCGGAA AAAATTGTGA AGGCCGGAAT TAAAAAAGTA
AGAATAAGAT CCGTATTAAC CTGCCATTCT GAATATGGAG TTTGTGCAAA GTGTTATGGA
GCCAACCTTG CAACCGGAGA AGAATGCAAT GTCGGTGAGG CTGTAGGTAT AATAGCGGCT
CAGTCCATAG GTGAACCGGG AACACAGCTT ACCATGAGAA CATTCCATAC TGGTGGAGTT
GCCGGCGAGG ACATAACCCA GGGTCTTCCC CGTGTGGAAG AATTGTTTGA GGCGAGAAAA
CCAAAGGGAC TGGCAATAAT TTCAGAAATA AAGGGTACTG TCAAGATATC TGAAACCAAG
AAAAAGAGAG AAATAGTTGT AACCTCGGAA GACGGTGAGA CCAGAAGCTA CCTGATTCCG
TACGGTTCCA GAATAAAAGT TTCCGACGGA GACCAGGTTG AAGCCGGTGA CGAACTTACA
GAAGGTTCGG TAAATCCACA TGACATATTG AAGATAAAAG GTGTGGAAGC CGTACAGACA
TATTTGGTTC ATGAAGTTCA AAAAGTTTAC CGGATGCAGG GTGTTGATAT CAACGACAAG
CATATTGAAG TTATTGTAAG ACAGATGCTC AGAAAAGTAA AAGTCGAAGA CCCGGGAGAT
ACGTCGCTTT TGCCGGGAGG GCTTGTGGAT GTGTTTGACT TTGAAGAGGA GAATGCCAAG
GCTATAGCCG AAGGAAAGAA ACCTGCAGTA GCAAAAAGAG CTCTTCTTGG TATCACAAAG
GCGGCATTGG CTACCGACTC ATTCCTGTCG GCTGCATCCT TCCAGGAAAC TACAAGAGTG
CTTACTGAAG CGGCAATAAA AGGAAAAGTC GACCCGTTGG TAGGACTTAA AGAAAATGTA
ATTATCGGAA AATTGATACC TGCGGGAACA GGAATGAGCA GATACAAGGA TATTACCATA
AGTACGGTAA CAGAATAG
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| Protein sequence | MFELNNFDSI RIGLASPEKI REWSRGEVKK PETINYRTLK PERDGLFCER IFGPQKDWEC
HCGKYKRIRY KGIVCDRCGV EVTRSKVRRE RMGHIELAAP VSHIWYFKGI PSRMGLLLDM
SPRALEKILY FAAYVVIDPG QTPLSKKQIL SEKEYRDSLE KFGPKFRAGM GAEAVRELLQ
EINLDELSAE LREEIKQSTG QKRVRAIKRL EVVEAFRQSQ NKPEWMILDV IPVIPPELRP
MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPDII VRNEKRMLQE AVDALIDNGR
RGRPVTGPGN RPLKSLSDML KGKQGRFRQN LLGKRVDYSG RSVIVVGPEL KIYQCGLPKE
MALELFKPFV MKKLVNDGLA HNIKSAKRMV ERVRNEVWDV LEEVIKEHPV LLNRAPTLHR
LGIQAFEPVL VEGRALKLHP LVCTAYNADF DGDQMAVHVP LSAEAQAEAR FLMLSANNLL
KPQDGKPVAV PTQDMVLGSY YLTILKEGAK GEGRVFTSMD EAVMAYDNGE IELHSKIKVR
MKRVVDGVEK SKIIETTLGR LIFNEAIPQD LGFVDRSDPD KIFDLEVDFL VGKNELKKII
DKSIKVHGTT KTAILLDKIK ELGFKYSTKG AITISISDMV IPEVKAKYIK ETEEKIEKIT
KQYKRGLISD EERYNSVIAA WTEASENITR ALINNLDRFN PVYMMSQSGA RGNINQIKQL
AGMRGLMADT SGKTIEFPIK ANFREGLTVM EFFISTHGAR KGLADTALRT ADSGYLTRRL
VDVSQDVIVR ETDCGTRKGI EVTDIKDGNE VIEELSERII GRYPVGNIVH PETGEIIVEA
GRMITDQDAE KIVKAGIKKV RIRSVLTCHS EYGVCAKCYG ANLATGEECN VGEAVGIIAA
QSIGEPGTQL TMRTFHTGGV AGEDITQGLP RVEELFEARK PKGLAIISEI KGTVKISETK
KKREIVVTSE DGETRSYLIP YGSRIKVSDG DQVEAGDELT EGSVNPHDIL KIKGVEAVQT
YLVHEVQKVY RMQGVDINDK HIEVIVRQML RKVKVEDPGD TSLLPGGLVD VFDFEEENAK
AIAEGKKPAV AKRALLGITK AALATDSFLS AASFQETTRV LTEAAIKGKV DPLVGLKENV
IIGKLIPAGT GMSRYKDITI STVTE
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