Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2666 |
Symbol | |
ID | 4808834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 3145576 |
End bp | 3148170 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640108081 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_001039058 |
Protein GI | 125975148 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0153597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATT ATTTTGAAAG TGTCGAGACC GTGCTCGAAC ATATGGGAAG CTCCAAAAAC GGCATTGACC CGAAGGAAGC TTCTTTGCGG CTCGAAAAAT ATGGCCGCAA CAAGCTGGAC GAAGGCAAGA AAAAGACCGT CTTTGGCAGA TTTTTAGACC AACTGAAAGA TCCAATGATC ATAGTTTTGA TTGTGGCCGC CATTATTTCA GGTTTTGCCG GAGAGCCGGC CGACTCAATC ATCATACTGA TGGTCGTGCT CATAAACTCA ATACTGGGCG TAGTGCAGGA AGGAAAGGCC GAAAAAGCCA TCGAAGCTTT GCAGAAAATG TCATCTCCTT ACTCAAAAGT CAGGAGAAAC GGCCGGGTAA TGCAAATCAA GTCCGAAGAA ATTGTACCCG GTGATATAGT TCTCCTTGAA GCAGGTGATG CCGTTCCTGC AGACATGAGG ATTATTGAAG CCTCAAGCCT TAAAATTGAA GAAGCATCCC TTACCGGGGA ATCAATACCC ATCGAAAAAG ATGCCGGGGC AATACCTCCA TCGGATAAAG ACATTCCTCT CGGTGACCGC CGCAACATGG CTTACATGGG TACCAATGTT GTATACGGCC GCGGTGAAGG TATTGTGGTA AATACCGGAA TGTCAACGGA AATGGGTAAA ATTGCAAATA TTATTTCCGG CACGGAAGAG GAAAAAACAC CTCTGCAAAA GAAACTTGCC GAACTGAGCA AAGTGCTTAG CATAGCTGTA CTGGGAATTT GCATATTCAT ATTTGTCTTT GGCGTATTAA AGAACGGAGG TTTTTCAAGA AACAACGTTC TGGAAATGTT TTTGCTGGCA ATCAGTCTGG CCGTTGCTGC AATCCCTGAA GGTTTGGTAG CGGTTGTTAC CATTGTTCTT TCCATCGGTG TCACAAAAAT GTCCAAACGC AATGCGATAA TCCGAAGACT TACCGCAGTT GAGACATTAG GCTGTACACA AATTATTTGC TCCGACAAGA CAGGTACTCT GACTCAGAAT AAAATGACTG TTGTAGATTC CTTCGGTGAC GTGGAAAAGC TTGCCGTTTC CATGGCTCTT TGCAACGATG CCGCTTTGTC CGGGGAAAAC GGAGAAGTAA TCGGCGAACC TACGGAAAGT GCCCTTGTAA GGTATGCTTT TGACATGGGC GTCAACAAAA ACGAACTGGA AAAATCAATG CCCCGTGTCG CAGAAGCCCC TTTTGATTCA ATGAGGAAAA TGATGTCCAC AGTGCACAAA ACCTCGGACG GAAAATTCAT TCAGTATACA AAGGGAGCAC CCGATGAGCT TTTGAAGAAA TGCACTCACA TACTTACAAA AGACGGTGTA GTTCCTCTGA CAGACAAACA CCGCACTGAA ATTCTCAATG AAAACAAGAG AATGGCAAAC AAAGCCCTTC GCGTATTGGC ATCGGCAATG AAAGAGACAG ACACTTTGCC TTCCGACACA TCTCCGGAAA ACCTGGAGCG GGATTTGACA TTTATAGGTC TTGCAGGCAT GATTGACCCT GTGCGCCCGG AGGTAAAAGC AGCAATTGAA GAGTGCCGTG ATGCCGGTAT ACGTCCTATT ATGATCACCG GTGACCATAA AGACACCGCA GTGGCCATTG CAAAGGAACT GGGCATTATA TCCGATGAAA GCCAGGCTAT CACCGGAGCG GAACTATCTG AAATATCCGA CAGCGATTTT GAAGAAAAAG TTAATAATTA TTCCGTATAT GCCCGGGTAC AGCCCGAACA CAAGGTACGA ATCGTAAATG CATGGAAAAA ACGCGGCAAG ATTACCGCAA TGACGGGAGA CGGCGTCAAT GACGCTCCGG CTCTTAAATC CGCCGATATA GGTGTCGGCA TGGGAATTAC CGGTACCGAT GTTACCAAAA ATGTGTCCGA CATGGTTCTG GCCGACGACA ACTTTGCTTC AATCGTCCAT GCCGTTGAAG AGGGCCGCAG GATATATGAC AACATCCGCA AATCCATACA GTTTCTTTTA TCTTCAAACT TGAGCGAAGT CATTGCACTG TTTATAGCTA CACTTAGAGG ATTTATACTG TTTTCGCCCA TACACATTCT GTGGATTAAC CTTGTAACCG ACTCATTACC TGCTATAGCA CTGGGTATGG AAGAAGCCGA AGAAGACATT ATGAAAAGGC CTCCGCGCAG TGCAAAAGAA GGTATTTTCG CCCATGGTCT GGGCTTTAGC GTAATATACC AAGGCATTGC CATTGCTGCT TTAACGTTGA TATCCTACTT TATAGGCAAC ACACAGTCCC ATATAACAGG AACTACAATG GCATTTTTGA CAATGTCCGT ATGTGAAGTT TTCCAGGCCC TCAACCTAAG ATCAATGACG AAATCAATTT TCAGATTGAA AACCCGCAAC AAAGTCCTGT TTGGTGCAAT GGTTATGGCT TTCGTTTTAT CGCTGTTTGT AATATATGTA CCGGGCATAA ACGACATATT CAAACTGACC CCGCTTTCGG GAGCAAACTT ACTTGTTTCA ATTGCGCTGG CTTTTGCGAT TATTCCTATT GTGGAAACAG TCAAGTTTGT TATATATTTG ATAAAGAAAG CATAA
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Protein sequence | MKHYFESVET VLEHMGSSKN GIDPKEASLR LEKYGRNKLD EGKKKTVFGR FLDQLKDPMI IVLIVAAIIS GFAGEPADSI IILMVVLINS ILGVVQEGKA EKAIEALQKM SSPYSKVRRN GRVMQIKSEE IVPGDIVLLE AGDAVPADMR IIEASSLKIE EASLTGESIP IEKDAGAIPP SDKDIPLGDR RNMAYMGTNV VYGRGEGIVV NTGMSTEMGK IANIISGTEE EKTPLQKKLA ELSKVLSIAV LGICIFIFVF GVLKNGGFSR NNVLEMFLLA ISLAVAAIPE GLVAVVTIVL SIGVTKMSKR NAIIRRLTAV ETLGCTQIIC SDKTGTLTQN KMTVVDSFGD VEKLAVSMAL CNDAALSGEN GEVIGEPTES ALVRYAFDMG VNKNELEKSM PRVAEAPFDS MRKMMSTVHK TSDGKFIQYT KGAPDELLKK CTHILTKDGV VPLTDKHRTE ILNENKRMAN KALRVLASAM KETDTLPSDT SPENLERDLT FIGLAGMIDP VRPEVKAAIE ECRDAGIRPI MITGDHKDTA VAIAKELGII SDESQAITGA ELSEISDSDF EEKVNNYSVY ARVQPEHKVR IVNAWKKRGK ITAMTGDGVN DAPALKSADI GVGMGITGTD VTKNVSDMVL ADDNFASIVH AVEEGRRIYD NIRKSIQFLL SSNLSEVIAL FIATLRGFIL FSPIHILWIN LVTDSLPAIA LGMEEAEEDI MKRPPRSAKE GIFAHGLGFS VIYQGIAIAA LTLISYFIGN TQSHITGTTM AFLTMSVCEV FQALNLRSMT KSIFRLKTRN KVLFGAMVMA FVLSLFVIYV PGINDIFKLT PLSGANLLVS IALAFAIIPI VETVKFVIYL IKKA
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