Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2645 |
Symbol | |
ID | 4808956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 3126927 |
End bp | 3127907 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640108058 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001039037 |
Protein GI | 125975127 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAA TTTTGGTAAC CGGTGCTGAT GGCTTTATCG GAAGCCATCT GACAGAGGAA CTGGTAAAGC AAGGATATAA AGTCAGAGCT TTTGTGTACT ATAACTCTTT CAATTCCTGG GGATGGCTGG ATACTTTTCC CAAAGAGATT ATGAAAGAAG TAGAGGTATT TGCCGGAGAC ATCAGGGATT CCAACGGTGT TTTGGAAGCA ATGAAAGGAA TTGACAAGGT TTTCCACCTT GCCGCCTTAG TGTCCATTCC CTTTAGTTAT CACTCACCGG AAGCATATGT GGACACCAAC ATCAAAGGTA CCTTAAACGT GCTTCAGGCA GCCAGAATCC TTGACACGTC AAGAGTGTTC ATTACCTCTA CGTCAGAAGT ATACGGAACG GCTCAATATG TTCCCATAGA CGAACATCAC CCTTATCAGG GACAGTCCCC GTATTCTGCG ACAAAAATAG GCGCCGACAG GCTGGCCGAA TCTTTTTACA GGAGCTTTAA CATACCAATA ACAATAGTAA GGCCGTTTAA TACATACGGA CCAAGACAAT CCGCCCGGGC TGTCATCCCG ACAATCATAA CCCAGCTCCT TTCGGGAAAA GAAGAAATCA GGCTTGGTTC ATTAACTCCC ACGAGAGACT TTAATTACGT CAAAGACACC GTAAACGGCT TTATTGAAAT ATCCAAAACA GACAAAACCA TAGGTGAGGA AATCAATATT GCAAGCCAGC AGGAAATATC CATCGGCAAG CTGGCCGGGG AACTGATACG GCAGATTAAT CCGAAGGCAA AAATTGTATG CGACGAACAA AGGATAAGGC CTGAAAAAAG CGAAGTCAAC AGGCTTCTGG GCTCCAATGA GAAACTTAAG AAGCTTACAA ACTGGAAACA AAATTATACC CTTGAGCAAG GCCTGGCAGA AACCATTGAG TTTATCAGGC ACAATTTAGA CAGGTACAAA ACCGACCTCT ACAACATCTA A
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Protein sequence | MEKILVTGAD GFIGSHLTEE LVKQGYKVRA FVYYNSFNSW GWLDTFPKEI MKEVEVFAGD IRDSNGVLEA MKGIDKVFHL AALVSIPFSY HSPEAYVDTN IKGTLNVLQA ARILDTSRVF ITSTSEVYGT AQYVPIDEHH PYQGQSPYSA TKIGADRLAE SFYRSFNIPI TIVRPFNTYG PRQSARAVIP TIITQLLSGK EEIRLGSLTP TRDFNYVKDT VNGFIEISKT DKTIGEEINI ASQQEISIGK LAGELIRQIN PKAKIVCDEQ RIRPEKSEVN RLLGSNEKLK KLTNWKQNYT LEQGLAETIE FIRHNLDRYK TDLYNI
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