Gene Cthe_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2645 
Symbol 
ID4808956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3126927 
End bp3127907 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content44% 
IMG OID640108058 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001039037 
Protein GI125975127 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA TTTTGGTAAC CGGTGCTGAT GGCTTTATCG GAAGCCATCT GACAGAGGAA 
CTGGTAAAGC AAGGATATAA AGTCAGAGCT TTTGTGTACT ATAACTCTTT CAATTCCTGG
GGATGGCTGG ATACTTTTCC CAAAGAGATT ATGAAAGAAG TAGAGGTATT TGCCGGAGAC
ATCAGGGATT CCAACGGTGT TTTGGAAGCA ATGAAAGGAA TTGACAAGGT TTTCCACCTT
GCCGCCTTAG TGTCCATTCC CTTTAGTTAT CACTCACCGG AAGCATATGT GGACACCAAC
ATCAAAGGTA CCTTAAACGT GCTTCAGGCA GCCAGAATCC TTGACACGTC AAGAGTGTTC
ATTACCTCTA CGTCAGAAGT ATACGGAACG GCTCAATATG TTCCCATAGA CGAACATCAC
CCTTATCAGG GACAGTCCCC GTATTCTGCG ACAAAAATAG GCGCCGACAG GCTGGCCGAA
TCTTTTTACA GGAGCTTTAA CATACCAATA ACAATAGTAA GGCCGTTTAA TACATACGGA
CCAAGACAAT CCGCCCGGGC TGTCATCCCG ACAATCATAA CCCAGCTCCT TTCGGGAAAA
GAAGAAATCA GGCTTGGTTC ATTAACTCCC ACGAGAGACT TTAATTACGT CAAAGACACC
GTAAACGGCT TTATTGAAAT ATCCAAAACA GACAAAACCA TAGGTGAGGA AATCAATATT
GCAAGCCAGC AGGAAATATC CATCGGCAAG CTGGCCGGGG AACTGATACG GCAGATTAAT
CCGAAGGCAA AAATTGTATG CGACGAACAA AGGATAAGGC CTGAAAAAAG CGAAGTCAAC
AGGCTTCTGG GCTCCAATGA GAAACTTAAG AAGCTTACAA ACTGGAAACA AAATTATACC
CTTGAGCAAG GCCTGGCAGA AACCATTGAG TTTATCAGGC ACAATTTAGA CAGGTACAAA
ACCGACCTCT ACAACATCTA A
 
Protein sequence
MEKILVTGAD GFIGSHLTEE LVKQGYKVRA FVYYNSFNSW GWLDTFPKEI MKEVEVFAGD 
IRDSNGVLEA MKGIDKVFHL AALVSIPFSY HSPEAYVDTN IKGTLNVLQA ARILDTSRVF
ITSTSEVYGT AQYVPIDEHH PYQGQSPYSA TKIGADRLAE SFYRSFNIPI TIVRPFNTYG
PRQSARAVIP TIITQLLSGK EEIRLGSLTP TRDFNYVKDT VNGFIEISKT DKTIGEEINI
ASQQEISIGK LAGELIRQIN PKAKIVCDEQ RIRPEKSEVN RLLGSNEKLK KLTNWKQNYT
LEQGLAETIE FIRHNLDRYK TDLYNI