| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2634 |
|---|
| Symbol | |
|---|
| ID | 4808945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3115776 |
|---|
| End bp | 3116390 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640108047 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001039026 |
|---|
| Protein GI | 125975116 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTATGTT TCGGAAAAGT AGGGATATTT ATTTCCAGTG TAGGCATCGA TAAAAAATAT
TTTGAAAACA TATACCGAAA ATATATTCCC GGAAATCCTG ACTTTAAAAA TGATTGGATA
CAATTTGTCA TTAGCCATGA AGTTATGGTA TATATAAAGA AATTCATAAC CGAGTACCAG
GAAAGAATTA TTGGATATAA AGATATTTTG GAAGCCCTTT CAGAAATTAT TTGCCATTCA
CTGATAAGAG GCATTGTCGG TGTAAAAACG GAGAAAAATC TTATATCTGA CAATTTTGAA
ATTGAAAATA TAATTGAATA TATGCATCAG CATTTCGGCC AAAAAATCAC TGTGGAAGAG
CTGGCTAAGA AAACCAATAT GTCAAAATCC CATTTCATCA GGGTTTTTAA AAAAATCACA
GGATTGTCTC CCATGGACTA TCTTATCAAT ATACGAATTG AAAAAGCAAA GAAACTTCTT
GGCGCAGGAA CTAAAAACAT TTCGGAAATA TCGTTTTTAT GCGGGTTTAA TAGTTTATCC
CATTTCTCTT CAACTTTTTC AAAAATTGTT GGAGTAAGTC CTTCAAAATA CAATAGCTTG
TATTCAAGAA ATTAG
|
|---|
| Protein sequence | MLCFGKVGIF ISSVGIDKKY FENIYRKYIP GNPDFKNDWI QFVISHEVMV YIKKFITEYQ
ERIIGYKDIL EALSEIICHS LIRGIVGVKT EKNLISDNFE IENIIEYMHQ HFGQKITVEE
LAKKTNMSKS HFIRVFKKIT GLSPMDYLIN IRIEKAKKLL GAGTKNISEI SFLCGFNSLS
HFSSTFSKIV GVSPSKYNSL YSRN
|
|---|
| |