Gene Cthe_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2626 
SymbolmurC 
ID4808937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3103788 
End bp3105197 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content42% 
IMG OID640108039 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_001039018 
Protein GI125975108 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000210646 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAAT TAAGCATACT GGATCCAAAT AAATTCAAGC ACGTGCATTT TATCGGGATT 
GGCGGAATAA GCATGAGCGG GCTGGCCGAA ATCCTTTTGA ACCTGGGTTT TACTGTGTCC
GGCTCGGACA TAAGATCCTC AAATATAACT TCAAAGCTTG AAAAGAAAGG AATTAAAATA
TATACAGGAC ATAGTGAGGA AAACATTAAA GATGCGGATC TCGTAGTATA TACGGCCGCC
GTAAAAAGTG ACAATCCGGA GCTTGCAAAA GCCAAAAGCC TCGGAATTCC CACTTTGGAC
AGAGCAACAT TGCTGGGCGA GATAATGAAA AAATATCCTT TTAGTGTTGC CGTATCCGGT
ACCCATGGAA AAACGACAAC CACATCCATG ATTTCGCTCA TTATGCTAAA ATCAGCTTTA
GACCCCACCA TTCACATAGG AGGAGAGCTT GATGCCATCG GTGGGAACAC ACGGATAGGC
TCAAATAAAT ATTTTGTCGC CGAGGCATGT GAATATGTGG AGAGCTTTTT GAAATTTCAT
CCTTATCTCG CTGTCGTATT AAATATTGAG GCGGATCACC TTGACTATTT TAAGGATATA
GAGCATATTA AAAACGCATT CTTGAAGTTT ATTCGTCTTG TTCCCGAAAA CGGCTATGTG
GTTGCATGTG CTGACGACCA AAACGTTTTG TCAATCCTCA AAGATGTGCA TTGTAATATA
ATTACCTTCG GCCTCAATTC AAAAAACGCA ATGTGGACGG CCGAGGATAT TTCTTTCAAT
GAAAACGGCT TTGCAGCGTT TACCGTACTT AAAGACAATG AAAGAATTAC AAACATCCAG
CTCAAGGTCC CGGGCATCCA CAATATAAGC AACGCCCTTG CTTCAATCGC CGCATGTTAC
GCCCTGGGGT GCAGTATCGA AAACATAAAG AAAGGCCTTG AAAGCTACAC CGGAATTCAC
CGCCGTTTCG AACTTAAGGG AATCGAAAAC AATATCAAGG TTGTGGATGA TTATGCGCAT
CATCCTTCAG AAATCAAAGC AACATTAAAG GCAGCAAGGA GCGGAAACTA TCCGAGAATC
TGGACCGTAT TCCAGCCGCA TACCTATACA AGAACAAAAT TTTTGTTGGA TGAATTCTCC
AAAGCCTTCA AAGATACGGA TAAAGTTATT ATTACAGACA TCTACTCCGC CCGGGAAAAA
GACACCGGTG AAATACATTC AAGGATTCTT GCGGAAAAGA TACGGGAAAA CGGTCAGGAT
GCCATATATC TTCCCGACTT TGAAGGAATC GTTGAATATC TCAAGAAGAA TGCTTCTCCG
GGAGATTTGA TAATTACGAT GGGAGCCGGC GATGTGTACA AGGTCGGTGA AATGTTCCTC
AAAGACAAGC AAATGGTGGC AGTAAGCTGA
 
Protein sequence
MEQLSILDPN KFKHVHFIGI GGISMSGLAE ILLNLGFTVS GSDIRSSNIT SKLEKKGIKI 
YTGHSEENIK DADLVVYTAA VKSDNPELAK AKSLGIPTLD RATLLGEIMK KYPFSVAVSG
THGKTTTTSM ISLIMLKSAL DPTIHIGGEL DAIGGNTRIG SNKYFVAEAC EYVESFLKFH
PYLAVVLNIE ADHLDYFKDI EHIKNAFLKF IRLVPENGYV VACADDQNVL SILKDVHCNI
ITFGLNSKNA MWTAEDISFN ENGFAAFTVL KDNERITNIQ LKVPGIHNIS NALASIAACY
ALGCSIENIK KGLESYTGIH RRFELKGIEN NIKVVDDYAH HPSEIKATLK AARSGNYPRI
WTVFQPHTYT RTKFLLDEFS KAFKDTDKVI ITDIYSAREK DTGEIHSRIL AEKIRENGQD
AIYLPDFEGI VEYLKKNASP GDLIITMGAG DVYKVGEMFL KDKQMVAVS