Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2626 |
Symbol | murC |
ID | 4808937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 3103788 |
End bp | 3105197 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640108039 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001039018 |
Protein GI | 125975108 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000210646 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAACAAT TAAGCATACT GGATCCAAAT AAATTCAAGC ACGTGCATTT TATCGGGATT GGCGGAATAA GCATGAGCGG GCTGGCCGAA ATCCTTTTGA ACCTGGGTTT TACTGTGTCC GGCTCGGACA TAAGATCCTC AAATATAACT TCAAAGCTTG AAAAGAAAGG AATTAAAATA TATACAGGAC ATAGTGAGGA AAACATTAAA GATGCGGATC TCGTAGTATA TACGGCCGCC GTAAAAAGTG ACAATCCGGA GCTTGCAAAA GCCAAAAGCC TCGGAATTCC CACTTTGGAC AGAGCAACAT TGCTGGGCGA GATAATGAAA AAATATCCTT TTAGTGTTGC CGTATCCGGT ACCCATGGAA AAACGACAAC CACATCCATG ATTTCGCTCA TTATGCTAAA ATCAGCTTTA GACCCCACCA TTCACATAGG AGGAGAGCTT GATGCCATCG GTGGGAACAC ACGGATAGGC TCAAATAAAT ATTTTGTCGC CGAGGCATGT GAATATGTGG AGAGCTTTTT GAAATTTCAT CCTTATCTCG CTGTCGTATT AAATATTGAG GCGGATCACC TTGACTATTT TAAGGATATA GAGCATATTA AAAACGCATT CTTGAAGTTT ATTCGTCTTG TTCCCGAAAA CGGCTATGTG GTTGCATGTG CTGACGACCA AAACGTTTTG TCAATCCTCA AAGATGTGCA TTGTAATATA ATTACCTTCG GCCTCAATTC AAAAAACGCA ATGTGGACGG CCGAGGATAT TTCTTTCAAT GAAAACGGCT TTGCAGCGTT TACCGTACTT AAAGACAATG AAAGAATTAC AAACATCCAG CTCAAGGTCC CGGGCATCCA CAATATAAGC AACGCCCTTG CTTCAATCGC CGCATGTTAC GCCCTGGGGT GCAGTATCGA AAACATAAAG AAAGGCCTTG AAAGCTACAC CGGAATTCAC CGCCGTTTCG AACTTAAGGG AATCGAAAAC AATATCAAGG TTGTGGATGA TTATGCGCAT CATCCTTCAG AAATCAAAGC AACATTAAAG GCAGCAAGGA GCGGAAACTA TCCGAGAATC TGGACCGTAT TCCAGCCGCA TACCTATACA AGAACAAAAT TTTTGTTGGA TGAATTCTCC AAAGCCTTCA AAGATACGGA TAAAGTTATT ATTACAGACA TCTACTCCGC CCGGGAAAAA GACACCGGTG AAATACATTC AAGGATTCTT GCGGAAAAGA TACGGGAAAA CGGTCAGGAT GCCATATATC TTCCCGACTT TGAAGGAATC GTTGAATATC TCAAGAAGAA TGCTTCTCCG GGAGATTTGA TAATTACGAT GGGAGCCGGC GATGTGTACA AGGTCGGTGA AATGTTCCTC AAAGACAAGC AAATGGTGGC AGTAAGCTGA
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Protein sequence | MEQLSILDPN KFKHVHFIGI GGISMSGLAE ILLNLGFTVS GSDIRSSNIT SKLEKKGIKI YTGHSEENIK DADLVVYTAA VKSDNPELAK AKSLGIPTLD RATLLGEIMK KYPFSVAVSG THGKTTTTSM ISLIMLKSAL DPTIHIGGEL DAIGGNTRIG SNKYFVAEAC EYVESFLKFH PYLAVVLNIE ADHLDYFKDI EHIKNAFLKF IRLVPENGYV VACADDQNVL SILKDVHCNI ITFGLNSKNA MWTAEDISFN ENGFAAFTVL KDNERITNIQ LKVPGIHNIS NALASIAACY ALGCSIENIK KGLESYTGIH RRFELKGIEN NIKVVDDYAH HPSEIKATLK AARSGNYPRI WTVFQPHTYT RTKFLLDEFS KAFKDTDKVI ITDIYSAREK DTGEIHSRIL AEKIRENGQD AIYLPDFEGI VEYLKKNASP GDLIITMGAG DVYKVGEMFL KDKQMVAVS
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