Gene Cthe_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2617 
Symbol 
ID4809039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3095742 
End bp3096662 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content42% 
IMG OID640108031 
Productpeptidase M23B 
Protein accessionYP_001039010 
Protein GI125975100 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTTA AAAAATTGTT TCCTGACAAG AAAATTTCAC AAAAGAAAGT GTTGGATTTT 
CTCGATAAAA AAGGATTCTA TATTGTTTTG GCTTTGTGTA TAACTGCAAT TGCAGCTACA
GCCGCAGTAA TTACAGCTCA TAACATACGC TCATCGAGAA GTATTGGTGA GGAAGATATA
ATCTCGCCTG ATATGGCAAG CAGTATAATG GATGAAAACG GAAATAGCAG TAGTTACTTG
TTACCGCAGG ACGGTTTTGA AAATGAAGAT GCGGCAGAAA CACTCGGAAA GGCATCCGAA
GCAGTAAAGC CGACCGAACC TGCTGCAAGT CCGAAAGTCC AGGAAAGTCC AAAACCTTCG
GACAAGCCTC AGAAAACAGA AACATCAACA AAAACGGAAA ACAAGGACGA GAAAACTCAA
AACACAAAAT CATCGGGAAA AACTGAAAGC AAATCCGCAA ACAAATCCGA AGGCAAGACT
GAGAGTGGCA AGAAAGTTAC ATTTGTAATG CCTGTTTATG GAGAAGTGAC TTTTGAATAT
GCTATGGACA GGCTGGTTTA TTCAAAAACT TTGGATGAAT GGCGCGCTCA CAGTGGTGTG
GATTTGAGAG CGGACAGAGG TACTCCTGTC AAAGTTGTTG CCGACGGTGT GGTAACTGAA
GTTAAAAACG ATCCCAGGTT TGGTGTGACT GTAATTGTTG AGCACGAAAA CGGCCTGAAA
ACAGTGTATG CAAATCTTGC CAGCGGAGAC ATGGTAACTC CGAACCAGAA GGTCAAACAG
GGTGAAATAA TCGGAAGCAT AGGGAATACC GCAATTATTG AATCAGCAGA ACCTGCACAC
CTTCACTTTG AAGTTTTGAA AGACAATAAA CCTGTTGACC CGAAGGATTA TCTCCAGTTG
CCTTCGGATG GCAAAAAATA G
 
Protein sequence
MDFKKLFPDK KISQKKVLDF LDKKGFYIVL ALCITAIAAT AAVITAHNIR SSRSIGEEDI 
ISPDMASSIM DENGNSSSYL LPQDGFENED AAETLGKASE AVKPTEPAAS PKVQESPKPS
DKPQKTETST KTENKDEKTQ NTKSSGKTES KSANKSEGKT ESGKKVTFVM PVYGEVTFEY
AMDRLVYSKT LDEWRAHSGV DLRADRGTPV KVVADGVVTE VKNDPRFGVT VIVEHENGLK
TVYANLASGD MVTPNQKVKQ GEIIGSIGNT AIIESAEPAH LHFEVLKDNK PVDPKDYLQL
PSDGKK