Gene Cthe_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2613 
Symbol 
ID4809035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3090992 
End bp3091852 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content43% 
IMG OID640108027 
ProductS-layer-like domain-containing protein 
Protein accessionYP_001039006 
Protein GI125975096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA AAAAGGCATG TGTGAGCATA ATATTTATAC TGCTTGGTTT CTTTTTGAGT 
TTGCAAAATG TCAATGCTCA CGGAGTTGTG TATGAGACGC GGCAAATAGA TCAAAACAAA
ATAAGAATTA CATTAAAGTG GTCCGATGAA GAAAAAAATG AAGACAAAGG TAAAGGTATT
GCCATTACCC ACTATTACCT GGTAAACGGC AAAACGCTGC ACATAGGATA TGAGACGGTT
GACGGGGAAT CCCGGTCATA TCTTGACTAT GATTTGACCG GTGCGATTCC GCCGATAAGG
ATAATTCTCT CAAACATTGA TAAGCCTGAC TGGGTGCCAT TTAACGATAT AAAAGGCATT
GAGACCGAGG AATATATTAC TCATCTTCAT GACGCGGGAA TTGTGAACGG AATGCCGGAC
GGTTCCTTCA GACCCGACAG CAATATTACC AGGGCAGAGT TCATGGTTCT TCTGGTAAAG
GCTTTAAAGC TTCAGGGACC GGCGGAAAAT ATCGCCGGGT TTACCGATAT TGACGGACAT
TGGGCAAAGG ATATAATACT TGTTGCGGCA AAACACGGGT TGATTTCGGG TTATGAGGAC
GGCACGGTAA GACCCGACCG CCCCATAACT GTGGCTGAAG CCTGTTCGGT TATAGCAAGG
GCTTTTGAGT TTAAAACAAC GAAAAACGGA ATTTATTCAA AATTAAAGCC CGACAAATGG
TACAGCAAGC CGGTCAAAAA AATGTTTGAT GTAGGTGTCC TGTCGGTCAA TGACAGTTTG
TACGAAAATT TTGATGAAGA AGCCGAAATA ACCAGAGCAA ATTGTGCCAT GATGGTAAGC
AGGGCATTGT CCACATATTA G
 
Protein sequence
MNIKKACVSI IFILLGFFLS LQNVNAHGVV YETRQIDQNK IRITLKWSDE EKNEDKGKGI 
AITHYYLVNG KTLHIGYETV DGESRSYLDY DLTGAIPPIR IILSNIDKPD WVPFNDIKGI
ETEEYITHLH DAGIVNGMPD GSFRPDSNIT RAEFMVLLVK ALKLQGPAEN IAGFTDIDGH
WAKDIILVAA KHGLISGYED GTVRPDRPIT VAEACSVIAR AFEFKTTKNG IYSKLKPDKW
YSKPVKKMFD VGVLSVNDSL YENFDEEAEI TRANCAMMVS RALSTY