Gene Cthe_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2596 
Symbol 
ID4809018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3068303 
End bp3068782 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content43% 
IMG OID640108010 
Productprotein tyrosine phosphatase 
Protein accessionYP_001038989 
Protein GI125975079 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.108724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TGCTTTTTGT GTGTACCGGA AACACTTGCA GGAGCAGTAT GGCGGAAGGC 
CTGTTTAATC ATGCCGTGGA GAATGATAAA GACGGTTTGA AAGATTTCAG GGCCTTTTCG 
GCGGGACTTT CCGCTTTTGA AGATGACTGG GCCAATCCAA AAGCGGTGAA GGTTTTAAAA 
GAACATTACA ATGTTGATAT TTCCTCTCAC CGCGCAAGAA AGATTACAAA AAGTGATGTG 
GAAAGTTCCT ATATCATACT GACGATGACC AAAGAGCACA AGAATGCTAT TTTGAAAATG 
TTTCCCGGGG CGGCGGATAA AACCTATACG GTAAAAGAAT ACGCTTACGG GGATGACGCA 
AACGGAGACT ATAATATGGA TATCAGCGAC CCTTACGGTT TCCCGGAAGA TGTGTACAAG 
ACATGCGCTG GGGAAATCAA GGATGCTTTG GACAGAATAA TAATGAAGCT TAAAAAGTAA
 
Protein sequence
MKKVLFVCTG NTCRSSMAEG LFNHAVENDK DGLKDFRAFS AGLSAFEDDW ANPKAVKVLK 
EHYNVDISSH RARKITKSDV ESSYIILTMT KEHKNAILKM FPGAADKTYT VKEYAYGDDA 
NGDYNMDISD PYGFPEDVYK TCAGEIKDAL DRIIMKLKK