Gene Cthe_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2593 
Symbol 
ID4809015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3065158 
End bp3066240 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content46% 
IMG OID640108007 
Productpeptide chain release factor 1 
Protein accessionYP_001038986 
Protein GI125975076 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000361971 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGA AGTTCCAGGC GGCAGAAAAC AGATATGATG AAATAAATCA CAGATTGAGC 
GACCCGGCTG TAATAGCAAA TCAGGATGAA TACAAAAAGC TTATGAAAGA ACATGCTGAG 
CTGGAAGTGC TTGTAACGAA ATATAATGAA TATAAAAAGC TCACCAAGGA AATTGCCGAT 
GCCAAAGAAA TGCTGAATGA AAAACTGGAC AAAGAGTTTC GGGAAATGGT TGAAACGGAG 
CTTAAAGAGG CACAGGAAAA GCTGGAAGTT CTGAAGAAGG AAATGAAAAT ACTTCTTCTT 
CCCAAGGACC CCAATGATGA GAGAAACGTT ATTGTTGAAA TCAGAGGCGG TGCCGGGGGA 
GATGAGGCTG CCCTGTTTGC CGGAGATTTG TTCAGGATGT ATACCCGGTA TGCCGAGAGA 
AATGGGTGGA AAACGGAAAT ACTTGATTCC AATCCTACGG AGATAGGTGG TTTCAAGGAA 
GTGGTGTTTT CCATTGAAGG GAATGGCGCA TACAGCAGGT TGAAATTTGA AAGCGGTGTG 
CACCGGGTGC AAAGAGTTCC GGTTACAGAA GCCAATGGAA GGGTGCATAC TTCCACGGTT 
ACGGTGGCGG TACTGCCGGA GGCTGAGGAA ATTGACGTGG AAATAAACCC AAATGATTTG 
AGAATTGATA CTTATAGAGC TTCCGGTGCC GGTGGACAGC ATATTAACAA AACCGATTCG 
GCCATAAGAA TAACACACTT GCCTACAGGG CTGGTTGTTT GCTGCCAGGA CCAGAGGTCC 
CAGCACAAGA ACAAGGAAAA AGCGATGAAA GTGCTAAGGT CCAAGCTCTA TGAGATGGCA 
CGGGAGCAGC AGCACAACGA GATTGCCCAG GAGAGAAAGA GCCAGGTGGG TACCGGTGAC 
AGAAGTGAGA GGATTAGAAC GTACAATTTT CCTCAAGGCC GTGTGACAGA CCACAGGATT 
GGACTTACCC TTTACAAGAT AGATGACATA CTTGACGGTG ATATTGACGA AATAATTGAC 
GCGTTGATTA CGACGGACCA GGCAAGCAAG CTTGCAAACG GCGCTGAAGA TGATGAGGAT 
TAA
 
Protein sequence
MFEKFQAAEN RYDEINHRLS DPAVIANQDE YKKLMKEHAE LEVLVTKYNE YKKLTKEIAD 
AKEMLNEKLD KEFREMVETE LKEAQEKLEV LKKEMKILLL PKDPNDERNV IVEIRGGAGG 
DEAALFAGDL FRMYTRYAER NGWKTEILDS NPTEIGGFKE VVFSIEGNGA YSRLKFESGV 
HRVQRVPVTE ANGRVHTSTV TVAVLPEAEE IDVEINPNDL RIDTYRASGA GGQHINKTDS 
AIRITHLPTG LVVCCQDQRS QHKNKEKAMK VLRSKLYEMA REQQHNEIAQ ERKSQVGTGD 
RSERIRTYNF PQGRVTDHRI GLTLYKIDDI LDGDIDEIID ALITTDQASK LANGAEDDED