Gene Cthe_2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2589 
Symbol 
ID4809011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3060203 
End bp3061561 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content37% 
IMG OID640108003 
Producthypothetical protein 
Protein accessionYP_001038982 
Protein GI125975072 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTA ATTTGGGCAT CATAAAAAAG GCAAAATTTC AAAAAGTTTT ACTTTTATAT 
TTGCTCTTGA TTTCAGTGGT TCGTCTTGTA ATTTTTTTGG TATCGGAGCC CATTATCTGT
CCTGATACAC AGTCTTACGT GGACCTGGCA GAGATGATTT CAAAACTTGA TCTTTCCGAT
TTTGACGGAC TTAGAACTCC AGGCTATCCT TTTATTATAT TGTTATCCGG ACTAAATCTG
AAAGTTGTAG TTCTTGTTCA GATGATAATG GGAGTCTTTA TTTCATATCT TATAGCCACA
ACTGTATATA AATTTACAAA CAATACAGTA TTATCCTTGG TCGCTTCATG CCTTTATTCG
CTGTTTATCC CGTTCTTGTT TTATGAAATG GCCATATTAA GCGAAACTAC GGCGGCTTTT
TTCATACTCT TAAGTTTTGT CTTGTTTGCC AACATTGATA ACAACCAAAG TAGAATTTTG
CCAAAAATGG TGGGTATTAT AATTATTTCA TGTTTTGCCG CGCTAACAAG GCCTATTTAC
TTTGTACTGC CGTTGTTGTA TACCGTATTT TTCATGTTTA TTCTTGCAAG AGGAAAATAT
AAATTTCCAA AAATATTATT ATATTCTTTT GTAAGTCTGG TACCCTTGTT TGTGTCTATA
ATCGGATGGT CATTTGTAAA TTGGAAGTAC AATGACACAT TCAGCATAGC CACGGGCCGC
GGGTTCGCTT TCATGGAAAT GGCCGGCGAC TACATTGAAC TTGCTCCTGA CGACTACCCA
TACAATGTAA TCAAAGAGGT ATATATAAGA GAAAGGGATA AAAACATCCA AGACGGAAAT
CCCCACATCG ACACAATATG GGGAATAACG GATGAGCTTA TGGAAAAAAC CGGGCTCGGT
TACGATGAAC TGGCAAAAAA AGTCAAAGAC ATGTGTATAA AGGTTATGTT AAAAAAGCCG
GAAATATATA TTAAAGCCGT AATAAGATCC GAAATCAATT TCTGGAAGAC TTTTGGAATC
CTTATCCGCA GGGAAACAAA TGTGTCCAGG CCGATCAAGT TTGTAAACAT TATCCAAAGA
AGTATTTTGA TTTTATTGCA AATCCCCTTC ATAACAGCAC CATTTGTATT CTTCATAAAT
CAGCGAAAAA GAGAAAACAG GCCGGACAGC CATAAAACAC TGCTTATTTT CGCTTTTGCA
TATATTTTGA TTGTCGGCGT GTCTTTCCTG ATAGCTCTTG TGGAAGGCGG CGAAGGCAGA
TTTGCAATGC CGACATTTCC GCTTCTTATC ATAAGCACTT TCGCACTTTA CAACTTGATT
TTACAAGAAA AAAGATTGCA TCATGATATA TCATCATGA
 
Protein sequence
MKLNLGIIKK AKFQKVLLLY LLLISVVRLV IFLVSEPIIC PDTQSYVDLA EMISKLDLSD 
FDGLRTPGYP FIILLSGLNL KVVVLVQMIM GVFISYLIAT TVYKFTNNTV LSLVASCLYS
LFIPFLFYEM AILSETTAAF FILLSFVLFA NIDNNQSRIL PKMVGIIIIS CFAALTRPIY
FVLPLLYTVF FMFILARGKY KFPKILLYSF VSLVPLFVSI IGWSFVNWKY NDTFSIATGR
GFAFMEMAGD YIELAPDDYP YNVIKEVYIR ERDKNIQDGN PHIDTIWGIT DELMEKTGLG
YDELAKKVKD MCIKVMLKKP EIYIKAVIRS EINFWKTFGI LIRRETNVSR PIKFVNIIQR
SILILLQIPF ITAPFVFFIN QRKRENRPDS HKTLLIFAFA YILIVGVSFL IALVEGGEGR
FAMPTFPLLI ISTFALYNLI LQEKRLHHDI SS