| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2556 |
|---|
| Symbol | |
|---|
| ID | 4809163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 3025845 |
|---|
| End bp | 3026858 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640107971 |
|---|
| Product | radical SAM family protein |
|---|
| Protein accession | YP_001038950 |
|---|
| Protein GI | 125975040 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA AAAAAATAAA CGGACAGGCA GTAAACGGAA AGAGAGAAAT GTTGGCAAGT
AAGTTGCCGC TGGATACTCC ATACTCAATA ACTATTTTCC CTATATATGC TTGCAATTTT
AGGTGTAAAT ATTGTCTTCA TTCATTGGAA AAAGACGAAA GAGAATTCAT TTCAGATACA
ATTACCATGC CATGGGAAAC ATATAAAAAA TGTATTGACG ATATATTAAA ATTCCCGCAC
AAGGTTAAAA TGTTGCATCT TTCAGGATTA GGAGAACCCT TGTTGCATAA AGACATCGGC
AAGATGGTGG CATATGCCAA TCAAAAGGGC GTTGCAGAAG GAATAGATAT TGTCACAAAC
GGGTCAATGT TAACAAAAGA GCTCACACAT GAATTGGTTG ATGCCGGGCT TACAGTATTG
CGTATTTCCC TTCAGGGCAT TAATGAAGAA CAGTATAAAA GAGAAGCCGG TATAGATATT
GATTTTGATG AATTTTATAA TAACATAAAA TACTTTTATG ATAATAGAGG AAATACAAAG
TTATATATTA AAGTTATCGA TGAAATATTG GATGACGGTC AGCAAGAAGA ATTTTTCAAT
ATGTTTGGTG ACATATGTGA TATCATTGCA ATAGAACATT TATGTCCATT TGTTGACAAA
ATAAATTATA CAGACACTTT TAACCAAAAT GAATTTTATG TTACGATGAA CGGTAACCAA
GTACCCAATA CCAATATTTG CCCGCAACCA TTTTATAGTT TGCAGATATA TCCTGACGGA
AAATGCATAC CGTGTTGTAC CGTAGAAAAA CCAATAGTTG TTGGGGACTG CTTAAAACAA
AGTCTGGTGC AAATCTGGAA CGGAGATGTT ATGAATAGCT TCAGAAGGCT ACAATTGCAG
TCTAAAAAAG AAAATAACCG AGTATGTGCA AAGTGTCAGC AATATAAGTA CGGTATGTTT
AAAGAAGATA TACTGGATGA GTATGCATCT GATTTACTAA AACTATATCA ATAG
|
|---|
| Protein sequence | MKAKKINGQA VNGKREMLAS KLPLDTPYSI TIFPIYACNF RCKYCLHSLE KDEREFISDT
ITMPWETYKK CIDDILKFPH KVKMLHLSGL GEPLLHKDIG KMVAYANQKG VAEGIDIVTN
GSMLTKELTH ELVDAGLTVL RISLQGINEE QYKREAGIDI DFDEFYNNIK YFYDNRGNTK
LYIKVIDEIL DDGQQEEFFN MFGDICDIIA IEHLCPFVDK INYTDTFNQN EFYVTMNGNQ
VPNTNICPQP FYSLQIYPDG KCIPCCTVEK PIVVGDCLKQ SLVQIWNGDV MNSFRRLQLQ
SKKENNRVCA KCQQYKYGMF KEDILDEYAS DLLKLYQ
|
|---|
| |