| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2544 |
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| Symbol | |
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| ID | 4809300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3012334 |
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| End bp | 3012897 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640107960 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001038939 |
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| Protein GI | 125975029 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000329231 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAAG AACGAGACAA TATATTAATT GAAAGTACCT TAAAAGGCAA TATAAATTCT
TTTGAGGAAT TGATGACGCT ATATCAGGGA AAGCTGTTCA ATTTTCTCTT GAAGATGACC
TCCTCCCGGG AGGACGCAGA GGAAATTACC CAGGAAGTAT TTATAAAGGT ATATAACAAC
CTGTATAAGT ACAACAACAG GTGGAGTTTC TCCACTTGGA TTTACCGTAT AGCCATAAAC
ACACTCCGGA GTGAATATAG AAAAGCAAAA AATGTAAAGA GTGTTGACTA TTACACAAAC
GTATCTGAGC TGCCTGCAAA CTTCAGTGAT TATCCCGAGC TGGCCTATGA AATGAAAGAG
CGGCAAAAGG AAATAATCAA ACTTATCGAC GAGCTTAAGG AAGACCAGAA AACAGCGTTG
CTTCTACGAT ATATGCAGGA TTTTTCTTTT AAAGAAATCG GCGACATATT GGGAATCTCT
CCTGAAGCTG CAAAGATGAA AATCCAGAGA GCCAAGCAGA GTATTTGCAA AAAGTATGAA
GAACTCGAAA AGGACGGTGG ATAA
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| Protein sequence | MNKERDNILI ESTLKGNINS FEELMTLYQG KLFNFLLKMT SSREDAEEIT QEVFIKVYNN
LYKYNNRWSF STWIYRIAIN TLRSEYRKAK NVKSVDYYTN VSELPANFSD YPELAYEMKE
RQKEIIKLID ELKEDQKTAL LLRYMQDFSF KEIGDILGIS PEAAKMKIQR AKQSICKKYE
ELEKDGG
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