| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2543 |
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| Symbol | |
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| ID | 4809299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3010934 |
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| End bp | 3012331 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640107959 |
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| Product | spore germination protein-like protein |
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| Protein accession | YP_001038938 |
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| Protein GI | 125975028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5401] Spore germination protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000191345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGCA ATTTTAATTT TGAAGACATA ATTAAATATT CCGAAAATCA TCTTTCGGAA
GAAGAGAAAA AGAGAATTAA AGAGCATCTG GATGTATGTG AAAAATGCCG AAAACGCTAT
GGCGTACTGA AATTTACAGA GGCTTACGCA AAAGACAGTT CCATGACAAG TGAAAGCATC
ACTAAAAATG TGATGGAAAC AATTGACGTA AACAGATACA GCAAAAGTAA AAAGTTTTTG
TTCGGCAGGA ATTTTTACAG AGCCCTGCCT GTTATAAAAC CAGTTTTGGC ATCCGCGGCA
GTATTTGTTG TGGTAATGGT GGGCATAACA AGTTTCGGAA GTCTCAGAGG ATTAATCAAC
AATTCCGGCG ATGTGAAACC TAATCCAACC AATCCGATTG CCAATTCTCA AAACACAAAC
CCGGCCGCTT TGCCTGAAAG TACAGCCCCG GCAGTTCAAA ATCCTGTGGA AAAGAAGGTA
ATCACGCTTT ACTATTCAAA TTCCAATGCG GATAAAGTGG TTGCAGAAAA AAGAGAAGTT
GAAATAAGCA AAGATACACA AATAGAAAGA TTGGTGTTTG AAGAATTGCA AAAGGGTCCG
AAAAACGAGG GATTAGTTGC CACAATACCA AAAGGGACCA GACTTTTATC AGTATCCACC
GAAAACGGCA TTTGCACACT TAATCTTTCC AAAGAGTTCG TTGACAACCA TCCCGGCGGA
ACAGCAGGTG AAACAATGAC TTTATTTTCA ATAGTCAATA CAATGACTGA GCTTCCCGGT
ATCGAGAAAG TACAGTTTCT TATTGAAGGC CAAAAACAGG ATGCATATAT ACATGTTGCA
TTTAGTGAAC CCTTTAAAAG AAACAACAGT ATTATCCAAA AGAGCCCAAG TGAGATAAAA
GCCGAAGTTG AAGCTAAGTC TCAGGAAGCG ATTAAGGCTA TCAAGGAAAA AGATATGGAA
AAGTTGGCCC AAATGGTACA TCCTGAAAAA GGTGTGTTGT TCTCCCCCTA TTCCCATATT
GAATTGGAAA AACATAAAGT ATTTACAAAG GATCAATTAA AAAATCTTAT GGAGTCGGAA
GAAGTATATA TCTGGGGAGA ATATGACGGC TCCGGTGACC CGATTAAGTT AACCTTTGCC
CAGTATTTCG ACAAATTTGT ATATGATCAT GATTTTGCGA ACGCCGAAAA AGTGGCATAC
AATGAAATAC AGCAATCTGG AAACACAATT GTCAATATTT CTGATGTATA TCCGGAAGGA
AAGTTTATGG ATTATTACTT CCCCGGATTC ACTCCCGAAT ATGACGGAAT GGACTGGGCA
AGTTTAAGAT TAGTTTTTGA GGAGTATGAC GGCCAGTGGT ATCTTGTATG TATTGCCCAT
GGCCAATGGA CTATTTAA
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| Protein sequence | MKCNFNFEDI IKYSENHLSE EEKKRIKEHL DVCEKCRKRY GVLKFTEAYA KDSSMTSESI
TKNVMETIDV NRYSKSKKFL FGRNFYRALP VIKPVLASAA VFVVVMVGIT SFGSLRGLIN
NSGDVKPNPT NPIANSQNTN PAALPESTAP AVQNPVEKKV ITLYYSNSNA DKVVAEKREV
EISKDTQIER LVFEELQKGP KNEGLVATIP KGTRLLSVST ENGICTLNLS KEFVDNHPGG
TAGETMTLFS IVNTMTELPG IEKVQFLIEG QKQDAYIHVA FSEPFKRNNS IIQKSPSEIK
AEVEAKSQEA IKAIKEKDME KLAQMVHPEK GVLFSPYSHI ELEKHKVFTK DQLKNLMESE
EVYIWGEYDG SGDPIKLTFA QYFDKFVYDH DFANAEKVAY NEIQQSGNTI VNISDVYPEG
KFMDYYFPGF TPEYDGMDWA SLRLVFEEYD GQWYLVCIAH GQWTI
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