| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2521 |
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| Symbol | |
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| ID | 4809277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2989961 |
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| End bp | 2990668 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640107937 |
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| Product | putative RNA polymerase sigma factor SigI |
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| Protein accession | YP_001038916 |
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| Protein GI | 125975006 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02895] RNA polymerase sigma-I factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000234194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATTCTG TTACTATAAA CCAAAGAGTT GAGGCAATAA AAAACAACGA AGAGGAAATA
AATCTTTTTG TAGAAGAGTA TAAACCATTC ATAGCAGCCT GCACGCAGAA GGTGGTTGGA
CGCTATGTTG CCTACGGACA GGATGATGAA CTTAGCATTG CTCTGATGGC TTTTGTGGAG
ACTATCCGTT CTTATGACGT CTCAAAAGGC AATTTCCTTT CCTTCTCCCA GAATGTTATT
AAAAGAAGAA TTATAGATTA TTACAGAAAA GAAAAGAAAC ACAGCGTGGT TGTTAATATA
AACGGGCACC TCGAAGACGA AGAAGAGGAG ACCGACCTTG GCATTGCCAT GTCCATTGAT
AAGTACTCGG AAGAAGAAAT CAGCGAGTAC AGAAGGCTCG AGCTTGAACA GTTGAAAAAA
GAGCTTAAAG AATGGGACAT ATCTTTTTTT GATTTGGTTA ACATATCACC AAAGCATAAA
AGGACCAAAA AGATTTATTC GAAAATAATA AAGTTTGTCC TTTCAAGACC GGATATTATG
GAGAAAATAA AGCAAAAGAA ATATTTACCC GTTGCAGAGA TAGAGCAGAG CCTTAAAATA
CCTCGGAAAA CAATTGAACG GGCTCGAAAA TATATTATAA CAGTAGTGAT AATATTTACC
GGAGATTACG AGTTTATTAG GGATTACGTA AACTGGGAGG TGGAATAA
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| Protein sequence | MYSVTINQRV EAIKNNEEEI NLFVEEYKPF IAACTQKVVG RYVAYGQDDE LSIALMAFVE
TIRSYDVSKG NFLSFSQNVI KRRIIDYYRK EKKHSVVVNI NGHLEDEEEE TDLGIAMSID
KYSEEEISEY RRLELEQLKK ELKEWDISFF DLVNISPKHK RTKKIYSKII KFVLSRPDIM
EKIKQKKYLP VAEIEQSLKI PRKTIERARK YIITVVIIFT GDYEFIRDYV NWEVE
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