| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2519 |
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| Symbol | |
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| ID | 4809275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2987849 |
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| End bp | 2989468 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640107935 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001038914 |
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| Protein GI | 125975004 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00968739 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGAATTG TAAAGCATTT TTTCAGGAAG GATGAAAAGA TGAAGAAGAT TTTGATATAT
GACTCTACCT TAAGGGATGG TGCCCAGGCA CAGGGTATTT CGTTCAGTGT TGAAGATAAA
CTGAAAATTG TGGAGAGACT TGACCGGCTC GGTATAAGCT ATATTGAAGC AGGTAACCCG
GGCTCCAACC CAAAGGATTT GGAGTTTTTT GACAGAATAG GGCGGGTCAA GTTAAGGCAT
GCAAAAATAA TCGCCTTTGG AAGTACCAGA AGAGTCAATG TAAGTGTTCA GGAGGATGCC
AATGTAAAAT CGCTTTTAAA GGCGGACACT CCGGCTGTGG CCATATTCGG CAAAAGCTGG
GACTTTCATG TTACCGATAT TTTAAAGACA ACACTGGATG AAAATTTGAG AATGATTTTT
GACACCATAT CCTTCTTTAA GAACAAAAAT AAAGAAGTGG TTTTTGATGC TGAGCATTTC
TTTGACGGAT ACAAGGCCAA CCCGGATTAT GCAATGAAAA CCCTCAAAAC TGCTGTTGAG
GCCGGAGCGG ACTGTATTTG CCTTTGCGAT ACCAATGGAG GAACATTCCC GAATGAAATC
AAGGATATTA CCGCCAGGGT TGTGAGCGAG TTTAACGTGA ATGTCGGTAT TCATTGCCAC
AATGACACGG GCATGGCGGT TGCCAACTCC ATTATGGCGG TGCTGGCCGG TGCCGTGCAG
GTTCAGGGGA CAATGAACGG GTTTGGAGAG AGAAGCGGTA ATGCCAATCT CTGCACAATA
ATACCCAATT TGCAGCTTAA AGCAGGCTAT GATTGCATAC CGCAGGAAAA CATGGCGGAC
CTTACGGCTA CTGCAAGGTC CATAAGTGAA ATTGCCAATG TTATACATGA TGAAAGGGCT
CCGTATGTAG GGAAATATGC ATTTGCCCAC AAGGCGGGAA TGCATGCGGA TGCGGTAACC
AAAAACTCCA TAGCTTACGA ACACATCAAC CCTGAAGTTG TCGGAAACGA AAGGCTTTTT
CTCATGTCGG AAGTTGCGGG AAGAAGCGCT GTGCTTCATT TAATCAAAAA TATTGACAGC
ACTATTACAA AGGATTCTCC CGAGACAAAA TTGATACTGG ACAAGCTCAA GGAGCTGGAA
TTTGAAGGCT ATCAGTACGA AGGTGCGGAG AGTTCTTTTG AAATTGTGAT TCGGAAAATC
CTTGGAAAAT ACCGTCCTTC CTTTGAACTT GGAGAGTTTA AGGTTGTGGT TAACGAACCG
TCTATTAGCG GTGCGAATTC TTCCGCCATG ATAAAGATTA ATGTGGACGG ACAGTATGAG
ATAACCGCGG ATGAGGGACA GGGTCCGGTA AATGCGCTGG ACAAGGCGCT AAGAAAGGCT
TTGGAGAAAT TTTATCCTCA GATTGCGGAA ATGAAGCTTA CCGACTACAA AGTTAGGGTT
CTTGATTCCA ACTCGGCTAC GGCTGCAAAG GTAAGGGTTT TAATTGAGTC AACCGACGGT
AAAGAAGTCT GGACAACCAT TGGAGTTTCA ACGGACATTA TTGAAGCCAG CTGGAAGGCG
TTGGTGGATT CTATAGAATA CAAGCTTATC AAGGACAAGG AAGCAAAACA AAAGTCTTAA
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| Protein sequence | MGIVKHFFRK DEKMKKILIY DSTLRDGAQA QGISFSVEDK LKIVERLDRL GISYIEAGNP
GSNPKDLEFF DRIGRVKLRH AKIIAFGSTR RVNVSVQEDA NVKSLLKADT PAVAIFGKSW
DFHVTDILKT TLDENLRMIF DTISFFKNKN KEVVFDAEHF FDGYKANPDY AMKTLKTAVE
AGADCICLCD TNGGTFPNEI KDITARVVSE FNVNVGIHCH NDTGMAVANS IMAVLAGAVQ
VQGTMNGFGE RSGNANLCTI IPNLQLKAGY DCIPQENMAD LTATARSISE IANVIHDERA
PYVGKYAFAH KAGMHADAVT KNSIAYEHIN PEVVGNERLF LMSEVAGRSA VLHLIKNIDS
TITKDSPETK LILDKLKELE FEGYQYEGAE SSFEIVIRKI LGKYRPSFEL GEFKVVVNEP
SISGANSSAM IKINVDGQYE ITADEGQGPV NALDKALRKA LEKFYPQIAE MKLTDYKVRV
LDSNSATAAK VRVLIESTDG KEVWTTIGVS TDIIEASWKA LVDSIEYKLI KDKEAKQKS
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