Gene Cthe_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2517 
Symbol 
ID4809273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2986290 
End bp2986802 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content42% 
IMG OID640107933 
Productacetolactate synthase, small subunit 
Protein accessionYP_001038912 
Protein GI125975002 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000223689 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGC ATACTTTATC GGTCCTGGTT GAAAACCATG CGGGAGTGCT GTCGAGAATA 
GCCGGTTTGT TCAGCAGGAG GGGATTTAAC ATTGACAGCC TTGCAGTGGG TGTTACTGAA
AATCCTGAGA TTTCAAGAAT GACAATTGTT GTCGACGGTG ACGACTACAT AGTTGAACAG
GTTACCAAAC AGTTAAACAA GCTTGTTGAT GTTATAAAGA TAAAAGAACT TGATGAATCC
GATTCGGTAA GCAGGGAGCT TGCTCTTATA AAGGTTGGGG CAAATGCTTC CACAAGGTCG
GAGATAGTTC AGATTGCCGA GATATTCAGG GCAAAAATAG TTGACGTGTC AAAAACCACG
CTGACCATTG AAATATCCGG CAGTGTGGAC AAAGTTGCCG CTTTGGAGGA CATGCTAAAG
CAGTTTGGCA TAAAAGAAAT TGTCAGAACA GGCACGATAG CCATTGAAAG AGGCAATAAA
GTTATAAAAA ATAAGAATAG TGATGAGGAG TGA
 
Protein sequence
MAKHTLSVLV ENHAGVLSRI AGLFSRRGFN IDSLAVGVTE NPEISRMTIV VDGDDYIVEQ 
VTKQLNKLVD VIKIKELDES DSVSRELALI KVGANASTRS EIVQIAEIFR AKIVDVSKTT
LTIEISGSVD KVAALEDMLK QFGIKEIVRT GTIAIERGNK VIKNKNSDEE