| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2506 |
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| Symbol | |
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| ID | 4809445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2973047 |
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| End bp | 2976088 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640107922 |
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| Product | S-layer-like domain-containing protein |
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| Protein accession | YP_001038901 |
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| Protein GI | 125974991 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA AGATTGGAAA AGTTTTGAGG CAAAACAAGT CTATAATTTC CGTTGTAGTT
ATAACAGCGA TTTTGTTTGT TTATAATACC GGAATGCTTT TTACGGGAAT ATGGGAAGGA
GCACTGTACA ATGTGAAGGC TGAGGAAGTT CCTTTAAAGC TCGAGTTTTT CAACAATGTG
AAGGATGACA ATGTAACCCT TATAAGTCCG TATTTTCGTG TTATCAATAA TAGTTCATCT
GATGAAATTT ATTTGCAGCA TGTGAAGATT AGGTATTATT TTACACTGGA CAGCTCGGAC
AGCGAAGAAA CCATGAATTA TGAGATTTAT TATGCGGGTA AAAGTAATAT AGACGGTACT
GGAGCAGTGG AAGATATAAA GCCGAATACA ATCGTTAAAA TTGCCAAAAT GGATATACCG
ACTGATATGG CAGACCATTA CCTTGAGATT GGATTTGACG AAAGTTGCGG AACCATAGGG
CCGGATAAAA AAGTTGAAGT TATGGTAAGT ATTTCGAAGG AGAAATACAA GAAGTTTATA
CAGACAAATG ACTACTCCTA TAATGATTCC GCCGAAAATT ACGTATCGTG GGAAAAAGTA
ACTCTATACC TGGATGGTGA GCTGATTTCA GGAATTGAGC CTAATATGTA TGCAAGCAGG
GAAACCGGTG CATGGTATAT GTTTGATGAA GCTGTCGAAG GTTCAACGAA CGAATTTAAG
GACTATAAAG GTAATCACGG CAATGCGGTA CTGTATTCGG CAAACGGTGT TGTGCCGGGA
TTGAACGGAA ACAGTGTGTC CCTGGACGGA GTTGATGATT ATGTTGCTTT GCCTGACGGA
ATAGCCGGTA CTTTCTACAA CTTTACTATA GCTTTCTGGG TGAGGCTGGA CACCATAGGT
GAACAGCCGA TATTTGATTT TTTCGATAGT GGTTCCAACA ACAAATATAT GCGTTTAACT
GCCGAAAGTG ATGGAAAAAT TAAGTTTGCA ATGACGCAGT CAGGTTATTA TGGTGAGAAG
ACCATTACTT CAGGCTCGGC TTTGACTGAA GGTGTCTGGA AGCATGTGGC AGTTACCTTG
TCCGGAGACA CCGGTACTTT GTATATTAAT GGAGAGAATG TTGGGGAAAA TAACACGCTT
TCTTTAAGAC CTTTAACATT TCTGGGAGAA ACTTCAAAAG GCTATATTGG AAAATCCCAT
CAAACAGATT CATCGGAAGA TCCATACTAT AATTCATATC TTCATGGAAT GATAGATGAT
TTCCGGATTT TCGACAGGGC TTTAAGTGCT GATGAAATTA AGACACTTGC AAGTGTTGCA
ACAAGGGTAA ATGATTCGGA TCCGGGAATA CATTACAGCA GTGGCTGGAG CCATAGCCAG
GAAAGAGATA AAGGTGATTA CTTAAATGAC GTTCATGAAC TTGATTCACC GGACGGAGAG
AACTGTTTTG AGTATACATT TACCGGAACC GGAGTGAATG TCATAGCTCC CCAATGCAGT
GATAACGGTG ACGCAGAGAT ATATATTGAC GGAAAACTTA TGAAGTCGGT GGCTATGAGC
GTTTATTCGG GCTACAATTC CCAGGCAGTG GTTTACAGTA AACTGGGACT GTCACTCGGA
ACCCATACAA TAAAAGTTGT ATTTAAAAAT GGTATTGGAA TTATAGACGC TTTAGACATA
ATGACAGGTG AAATAGTAAG TCCGAGTCCG ACGCCGACGC CAAGCCCAAC ACCGAGTCCG
ACACCGACGC CGAGCCCAAC ACCGAGTCCG ACACCGACGC CGACACCAAC ACCGAGCTCG
ACACCGACAT CGACACCGAC ACCGGAACCG AGTCCGACAT CGACGCCGAC ACCGGAACCG
AGTCCGACAT CGACGCCGAC ACCGGAACCA GAACCGGAGC CGACATCGAC GCCGACACCG
GAACTGAGCC CAAGCTCGAC TCCAGTACCG ACGCCGACAC CGACTCCAAC GCCAGCGCCA
AACCCTGCAC CGGAACCGGT ACCAATATCA ACACCGGTAC CGGAACCAAT ACTGATTCCG
ACTCCAACGC CAACCATGAC ACCGATGCCG ACACCGACCC CAACTCTTGA GGTCAAAAGC
GATCCATACC TTTCCGACCT TGTTGTGACA GGAGCAAAGC TTAAACCTGC GTTTGTTCCG
GATATACTGA ATTACGAGGC AGTGGCGGAG GAAGATGTAA GGTTTGTGTG TATTGTTGCT
TATGCACGGG ATGACGGAGC TGAGATTACT TTAAACGGTG TTCCTGTTAA AAGCGGAAGT
ATATCCCATG CTGTTGAGCT TAAGGAAGGA AAAAATGAGC TGATTGTTAA AGTTGTGGCA
GAAGATGGAA TAACATCAAG AACGTACCGA ATAAGTGTTT TACTTGAGGC ATTGCAATTG
CCTACACCAA CTCCTGATAA AAGCGGCAAT CCATTTTTCT CGTCATTGGA GGATTTGCTT
AAGGAAAATG AAGTGAGTCC AGACGGGACA AAGGGTGGGA TATTTGATGA TGTGCCCAGG
GGATATTGGG CGGAAGAGTA TATTCAAAAG CTCTATGAAA AGGGAATTAT AAGCGGTATT
GATGAAAAAA CGTTCATGCC CGGAAGACCT ATTACAAGGG CCGAGTTCAC ACAGATAATT
GTTAATTCCC TGAAAATCCC TTACAGAGAA GCCGGACTGC ATTTCAACGA CGTGACTGAA
AAAGACTGGT ATTACAAGAG CGTGTCTTCC GCCGCAGCCT TTGGAATAGT TGTCGGAAGA
CCCGACGGAA GTTTTGCTCC AAATGAATTT ATAACCAGAC AGGATATGGC AGTGGTTATT
GCCAAGTTTT TGGAGAAAAA ACATGACGGA AACCTGGAAG GAATGGGAAA AGGTCTGGTT
TTTGCCGACA GCGGCAATAT CTCGGAATAT GCGCGGGATT CGGTGGCGGC TGTGGTATCT
CAAGGGTTGA TGGTCGGAAA ACCCGGCAAC ATGTTTGATC CCAAAGGGCT TACCACAAGA
GCGGAAGCGG TAACGGTCAT TTGCAAGCTT ATGAAGTATT AG
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| Protein sequence | MKEKIGKVLR QNKSIISVVV ITAILFVYNT GMLFTGIWEG ALYNVKAEEV PLKLEFFNNV
KDDNVTLISP YFRVINNSSS DEIYLQHVKI RYYFTLDSSD SEETMNYEIY YAGKSNIDGT
GAVEDIKPNT IVKIAKMDIP TDMADHYLEI GFDESCGTIG PDKKVEVMVS ISKEKYKKFI
QTNDYSYNDS AENYVSWEKV TLYLDGELIS GIEPNMYASR ETGAWYMFDE AVEGSTNEFK
DYKGNHGNAV LYSANGVVPG LNGNSVSLDG VDDYVALPDG IAGTFYNFTI AFWVRLDTIG
EQPIFDFFDS GSNNKYMRLT AESDGKIKFA MTQSGYYGEK TITSGSALTE GVWKHVAVTL
SGDTGTLYIN GENVGENNTL SLRPLTFLGE TSKGYIGKSH QTDSSEDPYY NSYLHGMIDD
FRIFDRALSA DEIKTLASVA TRVNDSDPGI HYSSGWSHSQ ERDKGDYLND VHELDSPDGE
NCFEYTFTGT GVNVIAPQCS DNGDAEIYID GKLMKSVAMS VYSGYNSQAV VYSKLGLSLG
THTIKVVFKN GIGIIDALDI MTGEIVSPSP TPTPSPTPSP TPTPSPTPSP TPTPTPTPSS
TPTSTPTPEP SPTSTPTPEP SPTSTPTPEP EPEPTSTPTP ELSPSSTPVP TPTPTPTPAP
NPAPEPVPIS TPVPEPILIP TPTPTMTPMP TPTPTLEVKS DPYLSDLVVT GAKLKPAFVP
DILNYEAVAE EDVRFVCIVA YARDDGAEIT LNGVPVKSGS ISHAVELKEG KNELIVKVVA
EDGITSRTYR ISVLLEALQL PTPTPDKSGN PFFSSLEDLL KENEVSPDGT KGGIFDDVPR
GYWAEEYIQK LYEKGIISGI DEKTFMPGRP ITRAEFTQII VNSLKIPYRE AGLHFNDVTE
KDWYYKSVSS AAAFGIVVGR PDGSFAPNEF ITRQDMAVVI AKFLEKKHDG NLEGMGKGLV
FADSGNISEY ARDSVAAVVS QGLMVGKPGN MFDPKGLTTR AEAVTVICKL MKY
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