Gene Cthe_2426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2426 
Symbol 
ID4808142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2899030 
End bp2899830 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content41% 
IMG OID640107840 
ProductOmpA/MotB 
Protein accessionYP_001038821 
Protein GI125974911 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000112959 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAAGAAAACA GCTGACGGAT GACGAACCGG CGTCAGAAGG CGCGCCAGAA 
TGGTTGCAAA CTTACAGTGA TATGGTTACA CTGGTACTTA CCTTTTTTGT ACTCTTGTTT
TCCATGTCAA CTATTAGCAA GGAAAAATTT GAACAGCTTA GCAGTTCACT GAGTGCAGCA
TTTATGGGGA CCGGCCGTGG AGGCGTATAC GGTTATAATG ACGGAACGGT GCTATACAGC
GTAAAAGAAA ATACAACCGG TGACATACTG GAGGATGGTG AAGAGGCTTT TAATGAAGGA
AAGAGTGCAG AGATCGGAGC GTTTACGGGA GGAAACGCCG ACAAAGAAGC TCAGAAAATC
GAAGATTTTA TTAATGAGGT ACAGAATATT GTTGAAGAGA TGGACTTAGA TGAATATGTA
AAGGTAATTG AAGATGATAA AAGTTTGACG GTCAGAATGA ATTCCGTCAT ACTCTTTGAT
CTTGGTAAAG CGGATATAAA AGAACCCGGA AAAGAAACAT TAAGAAAAAT CGGAACATTA
ATAAAACAAC TGAATAAAAA TGCCGTTATA CAAGGACATA CGGACAATCT GCCGATAAAT
ACCATGCTGT TTCCTACCAA CTGGGAGCTG TCAACAAAGA GGGCAACCAA CGTTGTATTG
TTTCTTGTCG ACGAATGCGG TGTGGATCCG GTGAAACTAA CTGCTACAGG CAATGGCGAA
TTTAGGCCCA TAGCACCTAA CGATACGGAA GAGAACAGGC AAAAAAACAG AAGAATTGAT
ATCGTAATAG AGAAACAATG A
 
Protein sequence
MKKLRKQLTD DEPASEGAPE WLQTYSDMVT LVLTFFVLLF SMSTISKEKF EQLSSSLSAA 
FMGTGRGGVY GYNDGTVLYS VKENTTGDIL EDGEEAFNEG KSAEIGAFTG GNADKEAQKI
EDFINEVQNI VEEMDLDEYV KVIEDDKSLT VRMNSVILFD LGKADIKEPG KETLRKIGTL
IKQLNKNAVI QGHTDNLPIN TMLFPTNWEL STKRATNVVL FLVDECGVDP VKLTATGNGE
FRPIAPNDTE ENRQKNRRID IVIEKQ